Quality of Radiomic Features in Glioblastoma Multiforme: Impact of Semi-Automated Tumor Segmentation Software

被引:24
|
作者
Lee, Myungeun [1 ,2 ]
Woo, Boyeong [3 ]
Kuo, Michael D. [4 ,5 ]
Jamshidi, Neema [5 ]
Kim, Jong Hyo [1 ,2 ,3 ]
机构
[1] Seoul Natl Univ, Adv Inst Convergence Technol, Ctr Med IT Convergence Technol Res, Suwon 16229, South Korea
[2] Seoul Natl Univ Hosp, Dept Radiol, 101 Daehak Ro, Seoul 03080, South Korea
[3] Seoul Natl Univ, Grad Sch Convergence Sci & Technol, Dept Transdisciplinary Studies, Suwon 16229, South Korea
[4] Natl Chiao Tung Univ, Dept Elect & Comp Engn, Hsinchu 300, Taiwan
[5] Univ Calif Los Angeles, Dept Radiol Sci, Los Angeles, CA 90095 USA
基金
新加坡国家研究基金会;
关键词
Radiomics; Semi-automated segmentation; Feature quality; Glioblastoma multiforme; The Cancer Genome Atlas; The Cancer Imaging Archive; IMAGE FEATURES; LUNG; REPRODUCIBILITY; VOLUMETRY; CANCER;
D O I
10.3348/kjr.2017.18.3.498
中图分类号
R8 [特种医学]; R445 [影像诊断学];
学科分类号
1002 ; 100207 ; 1009 ;
摘要
Objective: The purpose of this study was to evaluate the reliability and quality of radiomic features in glioblastoma multiforme (GBM) derived from tumor volumes obtained with semi-automated tumor segmentation software. Materials and Methods: MR images of 45 GBM patients (29 males, 16 females) were downloaded from The Cancer Imaging Archive, in which post-contrastT1-weighted imaging and fluid-attenuated inversion recovery MR sequences were used. Two raters independently segmented the tumors using two semi-automated segmentation tools (TumorPrism3D and 3D Slicer). Regions of interest corresponding to contrast-enhancing Lesion, necrotic portions, and non-enhancing T2 high signal intensity component were segmented for each tumor. A total of 180 imaging features were extracted, and their quality was evaluated in terms of stability, normalized dynamic range (NDR), and redundancy, using intra-class correlation coefficients, cluster consensus, and Rand Statistic. Results: Our study results showed that most of the radiomic features in GBM were highly stable. Over 90% of 180 features showed good stability (intra-class correlation coefficient [ICC] >= 0.8), whereas only 7 features were of poor stability (ICC < 0.5). Most first order statistics and morphometric features showed moderate-to-high NDR (4 > NDR >= 1.), while above 35% of the texture features showed poor NDR (< 1). Features were shown to cluster into only 5 groups, indicating that they were highly redundant. Conclusion: The use of semi-automated software tools provided sufficiently reliable tumor segmentation and feature stability; thus helping to overcome the inherent inter-rater and intra-rater variability of user intervention. However, certain aspects of feature quality, including NDR and redundancy, need to be assessed for determination of representative signature features before further development of radiomics.
引用
收藏
页码:498 / 509
页数:12
相关论文
共 50 条
  • [31] Cementochronology (TCA): Evaluation of a semi-automated counting software
    Kuenzie, Melanie
    AMERICAN JOURNAL OF PHYSICAL ANTHROPOLOGY, 2013, 150 : 174 - 174
  • [32] A framework for semi-automated software evolution analysis composition
    Ghezzi, Giacomo
    Gall, Harald C.
    AUTOMATED SOFTWARE ENGINEERING, 2013, 20 (03) : 463 - 496
  • [33] A framework for semi-automated software evolution analysis composition
    Giacomo Ghezzi
    Harald C. Gall
    Automated Software Engineering, 2013, 20 : 463 - 496
  • [34] Progressive disease in glioblastoma: Benefits and limitations of semi-automated volumetry
    Huber, Thomas
    Alber, Georgina
    Bette, Stefanie
    Kaesmacher, Johannes
    Boeckh-Behrens, Tobias
    Gempt, Jens
    Ringel, Florian
    Specht, Hanno M.
    Meyer, Bernhard
    Zimmer, Claus
    Wiestler, Benedikt
    Kirschke, Jan S.
    PLOS ONE, 2017, 12 (02):
  • [35] Development of automated and semi-automated analysis software for coronary rest period
    Zainal Arief
    Tetsuo Sato
    Tomohisa Okada
    Shigehide Kuhara
    Shotaro Kanao
    Kaori Togashi
    Kotaro Minato
    Journal of Cardiovascular Magnetic Resonance, 12 (Suppl 1)
  • [36] Volumetric Brain Tumor Segmentation in High-Grade Glioma Using a Semi-Automated Workflow
    Perry, Josiah
    Nikpanah, Moozhan
    Chiu, Sheng-Chieh
    Fang, Yu-Hua
    McConathy, Jonathan
    JOURNAL OF NUCLEAR MEDICINE, 2024, 65
  • [37] Chipper: Open-source software for semi-automated segmentation and analysis of birdsong and other natural sounds
    Searfoss, Abigail M.
    Pino, James C.
    Creanza, Nicole
    METHODS IN ECOLOGY AND EVOLUTION, 2020, 11 (04): : 524 - 531
  • [38] Quality Assurance for Automated and Semi-Automated Pavement Condition Surveys
    Dalla Rosa, Francisco
    Gharaibeh, Nasir G.
    Fernando, Emmanuel G.
    Wimsatt, Andrew
    International Conference on Transportation and Development 2016: Projects and Practices for Prosperity, 2016, : 192 - 201
  • [39] MRI radiomic features of peritumoral edema may predict the recurrence sites of glioblastoma multiforme
    Long, Hao
    Zhang, Ping
    Bi, Yuewei
    Yang, Chen
    Wu, Manfeng
    He, Dian
    Huang, Shaozhuo
    Yang, Kaijun
    Qi, Songtao
    Wang, Jun
    FRONTIERS IN ONCOLOGY, 2023, 12
  • [40] Suitability of Semi-Automated Tumor Response Assessment of Liver Metastases using a Dedicated Software Package
    Kalkmann, J.
    Ladd, S. C.
    de Greiff, A.
    Forsting, M.
    Stattaus, J.
    ROFO-FORTSCHRITTE AUF DEM GEBIET DER RONTGENSTRAHLEN UND DER BILDGEBENDEN VERFAHREN, 2010, 182 (07): : 581 - 588