A new series of Sr3RE2(Ge3O9)(2) (RE = La, Pr, Nd, Sm, Eu, Gd) cyclogermanates has been prepared using an ethylenediaminetetraacetic acid assisted route. The powder XRD study reveals that the compounds crystallize in the monoclinic space group C2/c, Z = 4. A decrease in the crystal radius of RE3+ ions in Sr3RE2(Ge3O9)(2) (RE = La-Gd) causes a morphotropic phase transition followed by a step-like change of the lattice parameters. The transition is accompanied by internal reorganization, including the redistribution of rare earth and strontium ions among three symmetry independent Sr/RE sites, a conformation change of [Ge3O9](6-) rings and a variation of Sr/RE(2) atom coordination from seven-fold to nine-fold. Density functional theory calculations reveal that Sr3RE2(Ge3O9)(2) compounds are indirect bandgap materials with a band gap around 3.0 eV. The magnetic property measurements indicate that Sr3RE2(Ge3O9)(2) (RE = Pr, Sm, Gd) are Curie-Weiss paramagnets up to 2 K. For Sr3Eu2(Ge3O9)(2) an anomaly of magnetic susceptibility is found at about 60 K. A photoluminescence study of the Sr3Sm2(Ge3O9)(2) and Sr3Eu2(Ge3O9)(2) samples reveals an emission in the visible spectral range, corresponding to the characteristic 4f-4f transitions in rare earth ions.