Node balanced steady states: Unifying and generalizing complex and detailed balanced steady states

被引:5
|
作者
Feliu, Elisenda [1 ]
Cappelletti, Daniele [2 ]
Wiuf, Carsten [1 ]
机构
[1] Univ Copenhagen, Dept Math Sci, Univ Pk 5, DK-2100 Copenhagen, Denmark
[2] Univ Wisconsin, Dept Math, Van Vleck Hall 480 Lincoln Dr, Madison, WI 53706 USA
关键词
Reaction networks; Reaction graph; Deficiency; Matrix-tree theorem; Asymptotic stability; MASS-ACTION SYSTEMS; SUFFICIENT CONDITIONS; REACTION NETWORKS; EXISTENCE; STABILITY; KINETICS;
D O I
10.1016/j.mbs.2018.03.002
中图分类号
Q [生物科学];
学科分类号
07 ; 0710 ; 09 ;
摘要
We introduce a unifying and generalizing framework for complex and detailed balanced steady states in chemical reaction network theory. To this end, we generalize the graph commonly used to represent a reaction network. Specifically, we introduce a graph, called a reaction graph, that has one edge for each reaction but potentially multiple nodes for each complex. A special class of steady states, called node balanced steady states, is naturally associated with such a reaction graph. We show that complex and detailed balanced steady states are special cases of node balanced steady states by choosing appropriate reaction graphs. Further, we show that node balanced steady states have properties analogous to complex balanced steady states, such as uniqueness and asymptotic stability in each stoichiometric compatibility class. Moreover, we associate an integer, called the deficiency, to a reaction graph that gives the number of independent relations in the reaction rate constants that need to be satisfied for a positive node balanced steady state to exist. The set of reaction graphs (modulo isomorphism) is equipped with a partial order that has the complex balanced reaction graph as minimal element. We relate this order to the deficiency and to the set of reaction rate constants for which a positive node balanced steady state exists.
引用
收藏
页码:68 / 82
页数:15
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