Biomedical literature mining for text classification and construction of gene networks

被引:0
|
作者
Antonakaki, Despoina [1 ]
Kanterakis, Alexandros [1 ]
Potamias, George [1 ]
机构
[1] FORTH, Inst Comp Sci, GR-71110 Iraklion, Crete, Greece
关键词
D O I
暂无
中图分类号
TP18 [人工智能理论];
学科分类号
081104 ; 0812 ; 0835 ; 1405 ;
摘要
A multi-layered biomedical literature mining approach is presented aiming to the discovery of gene-gene correlations and the construction of respective gene networks. Utilization of the Trie-memory data structure enables efficient manipulation of different gene nomenclatures. The whole approach is coupled with a texts (biomedical abstracts) classification method. Experimental validation and evaluation results show the rationality, efficiency and reliability of the approach.
引用
收藏
页码:469 / 473
页数:5
相关论文
共 50 条
  • [21] Biomedical literature mining
    Hu, Xiaohua
    PROCEEDINGS OF THE 7TH IEEE INTERNATIONAL SYMPOSIUM ON BIOINFORMATICS AND BIOENGINEERING, VOLS I AND II, 2007, : 1446 - 1446
  • [22] GIS: a biomedical text-mining system for gene information discovery
    Chiang, JH
    Yu, HC
    Hsu, HJ
    BIOINFORMATICS, 2004, 20 (01) : 120 - 121
  • [23] Mining gene-related information from biomedical literature
    Tudor, Catalina O.
    Vijay-Shanker, K.
    Schmidt, Carl J.
    BIBMW: 2009 IEEE INTERNATIONAL CONFERENCE ON BIOINFORMATICS AND BIOMEDICINE WORKSHOP, 2009, : 335 - 335
  • [24] Text mining of biomedical literature: Doing well, but we could be doing better
    Andrade-Navarro, Miguel
    Perez-Iratxeta, Carol
    METHODS, 2015, 74 : 1 - 2
  • [25] @Note: A workbench for Biomedical Text Mining
    Lourenco, Analia
    Carreira, Rafael
    Carneiro, Sonia
    Maia, Paulo
    Glez-Pena, Daniel
    Fdez-Riverola, Florentino
    Ferreira, Eugenio C.
    Rocha, Isabel
    Rocha, Miguel
    JOURNAL OF BIOMEDICAL INFORMATICS, 2009, 42 (04) : 710 - 720
  • [26] Biomedical Text Mining and Its Applications
    Rodriguez-Esteban, Raul
    PLOS COMPUTATIONAL BIOLOGY, 2009, 5 (12)
  • [27] New frontiers in biomedical text mining
    Zweigenbaum, Pierre
    Demner-Fushman, Dina
    Yu, Hong
    Cohen, K. Bretonnel
    Pacific Symposium on Biocomputing 2007, 2007, : 205 - 208
  • [28] TEXT AND DATA MINING FOR BIOMEDICAL DISCOVERY
    Gonzalez, Graciela
    Cohen, Kevin Bretonnel
    Leaman, Robert
    Greene, Casey S.
    Shah, Nigam
    Kann, Maricel G.
    Ye, Jieping
    PACIFIC SYMPOSIUM ON BIOCOMPUTING 2014, 2014, : 312 - 315
  • [29] Genescene: Biomedical text and data mining
    Leroy, G
    Chen, H
    Martinez, JD
    Eggers, S
    Falsey, RR
    Kislin, KL
    Huang, Z
    Li, JX
    Xu, J
    McDonald, DM
    Ng, G
    2003 JOINT CONFERENCE ON DIGITAL LIBRARIES, PROCEEDINGS, 2003, : 116 - 118
  • [30] Text mining patents for biomedical knowledge
    Rodriguez-Esteban, Raul
    Bundschus, Markus
    DRUG DISCOVERY TODAY, 2016, 21 (06) : 997 - 1002