Feature Filtering Spectral Clustering Method Based on High Dimensional Online Clustering Method

被引:0
|
作者
Feng, Zizhou [1 ]
Gu, Yujian [1 ]
Yang, Bin [2 ]
Chen, Baitong [3 ]
Bao, Wenzheng [1 ]
机构
[1] Xuzhou Univ Technol, Sch Informat Engn, Xuzhou 221000, Jiangsu, Peoples R China
[2] Zaozhuang Univ, Sch Informat Sci & Engn, Zaozhuang 277160, Peoples R China
[3] Xuzhou 1 Peoples Hosp, Xuzhou 221000, Jiangsu, Peoples R China
关键词
Golgi appratus; Malonylation; SMOTE; Protein; DNA METHYLATION; N-6-ADENINE; SITES;
D O I
10.1007/978-3-030-97124-3_14
中图分类号
TP18 [人工智能理论];
学科分类号
081104 ; 0812 ; 0835 ; 1405 ;
摘要
Golgi is an important eukaryotic organelle. Golgi plays a key role in protein synthesis in eukaryotic cells, and its dysfunction will lead to various genetic and neurodegenerative diseases. In order to better develop drugs to treat diseases, one of the key problems is to identify the protein category of Golgi apparatus. In the past, the physical and chemical properties of Golgi proteins have often been used as feature extraction methods, but more accurate sub-Golgi protein identification is still challenged by existing methods. In this paper, we use the tape-bert model to extract the features of Golgi body. To create a balanced dataset from an unbalanced Golgi dataset, we used the SMOTE oversampling method. In addition, we screened out the important eigenvalues of 300 dimensions to identify the types of Golgi proteins. In 10-fold cross validation and independent test set test, the accuracy rate reached 90.6% and 95.31%.
引用
收藏
页码:157 / 164
页数:8
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