Four-locus high-resolution HLA typing in a sample of Mexican Americans

被引:20
|
作者
Klitz, W. [1 ,2 ]
Gragert, L. [3 ]
Maiers, M. [3 ]
Tu, B. [4 ]
Lazaro, A. [4 ]
Yang, R. [4 ]
Xu, Q. [4 ]
Masaberg, C. [4 ]
Ng, J. [4 ]
Hurley, C. K. [5 ]
机构
[1] Univ Calif Berkeley, Sch Publ Hlth, Berkeley, CA 94720 USA
[2] Inst Publ Hlth, Oakland, CA USA
[3] Natl Marrow Donor Program, Dept Bioinformat, Minneapolis, MN USA
[4] Georgetown Univ, Dept Pediat, Washington, DC 20057 USA
[5] Georgetown Univ, Dept Oncol, Washington, DC 20057 USA
来源
TISSUE ANTIGENS | 2009年 / 74卷 / 06期
关键词
haplotype frequency; Mexican American; Native American; WORLDWIDE POPULATIONS; HAPLOTYPE FREQUENCIES; MOLECULAR ANALYSIS; SERI INDIANS; CLASS-I; ALLELES; HLA-DRB1; GENES; POLYMORPHISM; DIVERSITY;
D O I
10.1111/j.1399-0039.2009.01374.x
中图分类号
Q2 [细胞生物学];
学科分类号
071009 ; 090102 ;
摘要
Mexicans are the most common minority population of the United States. From a sample of 553 bone marrow donor registrants of self-described Mexican ancestry, human leukocyte antigen (HLA) loci A, C, B and DRB1 were typed by highresolution sequence based typing (SBT) methods. A total of 47, 34, 76 and 46 distinct alleles at A, C, B and DRB1 respectively were identified, including 3 new alleles. The four-locus haplotype frequency distribution was extremely skewed with only 53.9% of 1106 chromosomes present with more than one estimated copy. Haplotypes of Native American origin were identified. These data form an initial basis for determining the requirements for an adequate donor pool for stem cell transplantation in this population.
引用
收藏
页码:508 / 513
页数:6
相关论文
共 50 条
  • [41] HIGH-RESOLUTION HLA-DRB1 SSP TYPING FOR CADAVERIC DONOR TRANSPLANTATION
    SAVELKOUL, PHM
    DEBRUYNGERAETS, DP
    VANDENBERGLOONEN, EM
    [J]. TISSUE ANTIGENS, 1995, 45 (01): : 41 - 48
  • [42] HIGH-RESOLUTION TYPING BY NEXT-GENERATION SEQUENCING IN A CLINICAL HLA LABORATORY.
    Pena, J. Ryan A.
    Berces, Attila
    Kent, Heather
    Major, Endre
    Hague, Tim
    Saidman, Susan L.
    [J]. HUMAN IMMUNOLOGY, 2013, 74 : 154 - 154
  • [43] SEQUENCING AS A METHOD FOR HIGH-RESOLUTION TYPING
    TILANUS, MGJ
    [J]. HUMAN IMMUNOLOGY, 1993, 36 (01) : 57 - 57
  • [44] SEQUENCING AS A METHOD FOR HIGH-RESOLUTION TYPING
    TILANUS, M
    VERSLUIS, L
    BOUWENS, A
    ROZEMULLER, E
    [J]. HUMAN IMMUNOLOGY, 1993, 37 : 131 - 131
  • [45] High-resolution HLA class I typing in the CEPH families: analysis of linkage disequilibrium among HLA loci
    Bugawan, TL
    Klitz, W
    Blair, A
    Erlich, HA
    [J]. TISSUE ANTIGENS, 2000, 56 (05): : 392 - 404
  • [46] The novel HLA-DRB1*14:221 allele was identified during high-resolution HLA typing
    Loginova, Maria
    Smirnova, Daria
    Paramonov, Igor
    Kozhemyako, Oxana
    [J]. HLA, 2020, 96 (02) : 231 - 232
  • [47] Comparison of high-resolution HLA-DR typing by PCR-SSP and LABType SSO
    Orford, G.
    Beales, P. A.
    [J]. INTERNATIONAL JOURNAL OF IMMUNOGENETICS, 2008, 35 (06) : 498 - 498
  • [48] Growing evidence that 2-field high-resolution HLA typing is important for kidney transplantation
    Baxter-Lowe, Lee Ann
    [J]. AMERICAN JOURNAL OF TRANSPLANTATION, 2020, 20 (12) : 3277 - 3278
  • [49] IMPACT OF HIGH-RESOLUTION HLA TYPING ON THE OUTCOME OF DUAL UNIT UMBILICAL CORD BLOOD TRANSPLANTATION
    Kitsiou, Vassiliki
    Panitsas, Fotis
    Baltadakis, Ioannis
    Athanassiades, Theofilos
    Kouniaki, Diamanto
    Tarassi, Katerina
    Papageorgiou, Katerina
    Gigantes, Stavros
    Apostolodis, Ioannis
    Karakasis, Dimitrios
    Harhalakis, Nikolaos
    Papasteriades, Chryssa
    [J]. TISSUE ANTIGENS, 2012, 79 (06): : 441 - 441
  • [50] Interaction between SBT and SSP analysis to solve ambiguities occurring in HLA high-resolution typing
    Battarra, Mariarosa
    Andreani, Marco
    Testa, Giuseppe
    Condello, Rossella
    Guagnano, Annalisa
    Rosati, Renata
    Testi, Manuela
    [J]. TISSUE ANTIGENS, 2010, 75 (05): : 538 - 538