Virtual Screening Techniques in Drug Discovery: Review and Recent Applications

被引:80
|
作者
da Silva Rocha, Sheisi F. L. [1 ]
Olanda, Carolina G. [1 ]
Fokoue, Harold H. [2 ]
Sant'Anna, Carlos M. R. [1 ,2 ,3 ]
机构
[1] Univ Fed Rural Rio de Janeiro, Inst Quim, Programa Posgrad Quim, Seropedica, Brazil
[2] Univ Fed Rio de Janeiro, Lab Avaliacao & Sintese Substacias Bioat LASSBio, Rio De Janeiro, Brazil
[3] Univ Fed Rural Rio de Janeiro, Dept Quim Fundamental, Inst Quim, Rodovia BR 465,Km 07, BR-23890000 Seropedica, RJ, Brazil
关键词
Ligand based virtual screening; Structure based virtual screening; Virtual libraries; Drug design; Database filtering; Model validation; FINGERPRINT SIMILARITY SEARCH; MOLECULAR DOCKING; MEDICINAL CHEMISTRY; PHARMACOPHORE MODELS; LIBRARY DESIGN; CHEMICAL SPACE; BINDING-SITE; LARGE-SCALE; DATABASE; INHIBITORS;
D O I
10.2174/1568026619666190816101948
中图分类号
R914 [药物化学];
学科分类号
100701 ;
摘要
The discovery of bioactive molecules is an expensive and time-consuming process and new strategies are continuously searched for in order to optimize this process. Virtual Screening (VS) is one of the recent strategies that has been explored for the identification of candidate bioactive molecules. The number of new techniques and software that can be applied in this strategy has grown considerably in recent years, so, before their use, it is necessary to understand the basics an also the limitations behind each one to get the most out of them. It is also necessary to assess the real contributions of this strategy so that more significant progress can be made in the future. In this context, this review aims to discuss some important points related to VS, including the use of virtual ligand and biotarget libraries, structure-based and ligand-based VS techniques, as well as to present recent cases where this strategy was successfully applied.
引用
收藏
页码:1751 / 1767
页数:17
相关论文
共 50 条
  • [11] Recent Trends in Library Design and Virtual Screening in Medicinal Chemistry and Drug Discovery
    Kumar, B. V. S. Suneel
    Sriram, D.
    Yogeeswari, P.
    [J]. CURRENT TOPICS IN MEDICINAL CHEMISTRY, 2014, 14 (16) : 1865 - 1865
  • [12] Augmenting Hit Identification by Virtual Screening Techniques in Small Molecule Drug Discovery
    Yan, Xin Cindy
    Sanders, John M.
    Gao, Ying-Duo
    Tudor, Matthew
    Haidle, Andrew M.
    Klein, Daniel J.
    Converso, Antonella
    Lesburg, Charles A.
    Zang, Yi
    Wood, Harold B.
    [J]. JOURNAL OF CHEMICAL INFORMATION AND MODELING, 2020, 60 (09) : 4144 - 4152
  • [13] Virtual screening strategies in drug discovery
    McInnes, Campbell
    [J]. CURRENT OPINION IN CHEMICAL BIOLOGY, 2007, 11 (05) : 494 - 502
  • [14] Virtual compound screening in drug discovery
    Stumpfe, Dagmar
    Ripphausen, Peter
    Bajorath, Juergen
    [J]. FUTURE MEDICINAL CHEMISTRY, 2012, 4 (05) : 593 - 602
  • [16] NMR screening techniques in drug discovery and drug design
    Stockman, BJ
    Dalvit, C
    [J]. PROGRESS IN NUCLEAR MAGNETIC RESONANCE SPECTROSCOPY, 2002, 41 (3-4) : 187 - 231
  • [17] Integration of virtual screening into the drug discovery process
    Chin, DN
    Chuaqui, CE
    Singh, J
    [J]. MINI-REVIEWS IN MEDICINAL CHEMISTRY, 2004, 4 (10) : 1053 - 1065
  • [18] Virtual screening in drug discovery - A computational perspective
    Reddy, A. Srinivas
    Pati, S. Priyadarshini
    Potukuchi, Praveen Kumar
    Pradeep, H. N.
    Sastry, G. Narahari
    [J]. CURRENT PROTEIN & PEPTIDE SCIENCE, 2007, 8 (04) : 329 - 351
  • [19] The holistic integration of virtual screening in drug discovery
    Tanrikulu, Yusuf
    Krueger, Bjoern
    Proschak, Ewgenij
    [J]. DRUG DISCOVERY TODAY, 2013, 18 (7-8) : 358 - 364
  • [20] Virtual screening for fragment based drug discovery
    Yuan, Qiong
    Liu, Cynthia
    Winer, Fred
    [J]. ABSTRACTS OF PAPERS OF THE AMERICAN CHEMICAL SOCIETY, 2009, 237