Population genetic differentiation of the black rockfish Sebastes schlegelii revealed by microsatellites

被引:12
|
作者
Gao, Tianxiang [1 ]
Han, Zhigiang [1 ]
Zhang, Xiumei [2 ]
Luo, Jing [3 ]
Yanagimoto, Takashi [4 ]
Zhang, Hui [5 ]
机构
[1] Zhejiang Ocean Univ, Coll Fisheries, Zhoushan 316022, Peoples R China
[2] Ocean Univ China, Coll Fisheries, Qingdao 266003, Peoples R China
[3] Yunnan Univ, Kunming 650091, Peoples R China
[4] Natl Res Inst Fisheries Sci, Yokohama, Kanagawa 2368648, Japan
[5] Chinese Acad Sci, Inst Oceanol, Qingdao 266071, Peoples R China
基金
中国国家自然科学基金;
关键词
Sebastes schlegelii; Microsatellite; Population structure; Genetic differentiation; Larval dispersal; EARLY-LIFE HISTORY; MARINE POPULATIONS; SELF-RECRUITMENT; NULL ALLELES; DISPERSAL; CONNECTIVITY; FISH; SCORPAENIDAE; DISTANCE; PROGRAM;
D O I
10.1016/j.bse.2016.07.013
中图分类号
Q5 [生物化学]; Q7 [分子生物学];
学科分类号
071010 ; 081704 ;
摘要
Sebastes schlegelii is one of the fishes that aggregate around drifting seaweed during their early development. To examine the population genetic structure of S. schlegelii, eight microsatellite DNA loci were used to interpret their life history characteristics and larval dispersal strategy. Two hundred and ten individuals from nine sites across the entire range of S. schlegelii in China and Japan were analyzed. The results indicated that the polymorphism information content, observed heterozygosity, and gene diversity of S. schlegelii were high. The results of analysis of molecular variance, pairwise F-ST values, and exact-P tests showed no genetic divergence among the different geographical populations and indicted the existence of high gene flow. There was no IBD pattern among populations. The results of the STRUCTURE analysis showed all the populations of S. schlegelii shared one gene pool. We concluded that larval dispersal with drifting seaweed and the environmental factors of the currents might play important roles in shaping the contemporary phylogeographical pattern and genetic homogeneity of S. schlegelii. The results of the microsatellite analysis were in accordance with the results revealed by mitochondrial DNA sequences and amplified fragment length polymorphism markers. (C) 2016 Elsevier Ltd. All rights reserved.
引用
收藏
页码:170 / 177
页数:8
相关论文
共 50 条
  • [41] Identification and characterization of a cathepsin K homologue that interacts with pathogen bacteria in black rockfish, Sebastes schlegelii
    He, Shu-wen
    Du, Xue
    Wang, Guang-hua
    Wang, Jing-jing
    Xie, Bing
    Gu, Qin-qin
    Zhang, Min
    Gu, Han-jie
    FISH & SHELLFISH IMMUNOLOGY, 2020, 98 : 499 - 507
  • [42] Identification of tissue-specific expression of CXCL14 in black rockfish (Sebastes schlegelii)
    Bae, Hyocheol
    Yang, Changwon
    Lim, Whasun
    Song, Gwonhwa
    FISH & SHELLFISH IMMUNOLOGY, 2021, 112 : 135 - 142
  • [43] Use of calcein and alizarin red S for immersion marking of black rockfish Sebastes schlegelii juveniles
    L Hongjian
    ZHANG Xiumei
    XI Dan
    GAO Tianxiang
    ChineseJournalofOceanologyandLimnology, 2014, 32 (01) : 88 - 98
  • [44] New insights on folliculogenesis and follicular placentation in marine viviparous fish black rockfish (Sebastes schlegelii)
    Xu, Xiaojie
    Wang, Xueying
    Liu, Qinghua
    Qi, Xin
    Zhou, Li
    Liu, Haoming
    Li, Jun
    GENE, 2022, 827
  • [45] Experimental study on the effect of sound stimulation on hearing and behavior of juvenile black rockfish (Sebastes schlegelii)
    Wang, Yining
    Huang, Liuyi
    Xing, Binbin
    FRONTIERS IN MARINE SCIENCE, 2023, 10
  • [46] Extracellular traps in skin lesions infected with lymphocystis disease virus in black rockfish ( Sebastes schlegelii) )
    Li, Qian
    Gan, Qiujie
    Chi, Heng
    Meng, Xianghu
    Dalmo, Roy Ambli
    Sheng, Xiuzhen
    Tang, Xiaoqian
    Xing, Jing
    Zhan, Wenbin
    FISH & SHELLFISH IMMUNOLOGY, 2024, 150
  • [47] Effects of environmental enrichment on the welfare of juvenile black rockfish Sebastes schlegelii: Growth, behavior and physiology
    Zhang, Zonghang
    Bai, Qingqing
    Xu, Xiuwen
    Guo, Haoyu
    Zhang, Xiumei
    AQUACULTURE, 2020, 518
  • [48] Predicting current and future global distribution of black rockfish (Sebastes schlegelii) under changing climate
    Chen, Yunlong
    Shan, Xiujuan
    Ovando, Daniel
    Yang, Tao
    Dai, Fangqun
    Jin, Xianshi
    ECOLOGICAL INDICATORS, 2021, 128
  • [49] Potential loci and candidate genes associated with Vibrio anguillarum resistance in black rockfish (Sebastes schlegelii) revealed by BSA-seq analysis
    Han, Miao
    Liu, Yuxiang
    Jin, Chaofan
    Wang, Xuangang
    Song, Weihao
    He, Yan
    Zhang, Quanqi
    AQUACULTURE, 2023, 566
  • [50] Use of calcein and alizarin red S for immersion marking of black rockfish Sebastes schlegelii juveniles
    Hongjian Lü
    Xiumei Zhang
    Dan Xi
    Tianxiang Gao
    Chinese Journal of Oceanology and Limnology, 2014, 32 : 88 - 98