A Locality-based Threading Algorithm for the Configuration-Interaction Method

被引:0
|
作者
Shan, Hongzhang [1 ]
Williams, Samuel [1 ]
Johnson, Calvin [2 ]
McElvain, Kenneth [3 ]
机构
[1] Lawrence Berkeley Natl Lab, Computat Res Div, Berkeley, CA 94720 USA
[2] San Diego State Univ, Dept Phys, San Diego, CA 92182 USA
[3] Univ Calif Berkeley, Dept Phys, Berkeley, CA 94720 USA
关键词
D O I
10.1109/IPDPSW.2017.15
中图分类号
TP3 [计算技术、计算机技术];
学科分类号
0812 ;
摘要
The Configuration Interaction (CI) method has been widely used to solve the non-relativistic many-body Schrodinger equation. One great challenge to implementing it efficiently on manycore architectures is its immense memory and data movement requirements. To address this issue, within each node, we exploit a hybrid MPI+OpenMP programming model in lieu of the traditional flat MPI programming model. In this paper, we develop optimizations that partition the workloads among OpenMP threads based on data locality, which is essential in ensuring applications with complex data access patterns scale well on manycore architectures. The new algorithm scales to 256 threads on the 64-core Intel Knights Landing (KNL) manycore processor and 24 threads on dual-socket Ivy Bridge (Xeon) nodes. Compared with the original implementation, the performance has been improved by up to 7x on the Knights Landing processor and 3x on the dual-socket Ivy Bridge node.
引用
收藏
页码:1178 / 1187
页数:10
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