Genome-Wide Association Study and Polygenic Risk Scores of Serum DHEAS Levels in a Chilean Children Cohort

被引:6
|
作者
Patricio Miranda, Jose [1 ,2 ,3 ]
Cecilia Lardone, Maria [4 ]
Rodriguez, Fernando [4 ]
Cutler, Gordon B. [5 ]
Luis Santos, Jose [1 ]
Corvalan, Camila [6 ]
Pereira, Ana [6 ]
Mericq, Veronica [4 ]
机构
[1] Pontificia Univ Catolica Chile, Sch Med, Dept Nutr Diabet & Metab, Santiago 8331150, Chile
[2] Pontificia Univ Catolica Chile, Adv Ctr Chron Dis ACCDiS, Santiago 8380492, Chile
[3] Univ Chile, Santiago 8380492, Chile
[4] Univ Chile, Sch Med, Inst Maternal & Child Res, Santiago 8360160, Chile
[5] Gordon Cutler Consultancy LLC, Deltaville, VA 23043 USA
[6] Univ Chile, Fac Med, Inst Nutr & Food Technol INTA, Santiago 7830490, Chile
来源
关键词
DHEAS; adrenarche; pubarche; polygenic risk score; GWAS; human genetics; genomics; HUMAN ADRENOCORTICAL-CELLS; DEHYDROEPIANDROSTERONE-SULFATE; PUBERTAL CHANGES; RECEPTOR; GENE; ADRENARCHE; PROLACTIN; LOCI; SECRETION; GIRLS;
D O I
10.1210/clinem/dgab814
中图分类号
R5 [内科学];
学科分类号
1002 ; 100201 ;
摘要
Context Adrenarche reflects the developmental growth of the adrenal zona reticularis, which produces increasing adrenal androgen secretion (eg, dehydroepiandrosterone [DHEA]/dehydroepiandrosterone sulfate [DHEAS]) from approximately age 5 to 15 years. Objective We hypothesized that the study of the genetic determinants associated with variations in serum DHEAS during adrenarche might detect genetic variants influencing the rate or timing of this process. Methods Genome-wide genotyping was performed in participants of the Chilean pediatric Growth and Obesity Chilean Cohort Study (GOCS) cohort (n = 788). We evaluated the genetic determinants of DHEAS levels at the genome-wide level and in targeted genes associated with steroidogenesis. To corroborate our findings, we evaluated a polygenic risk score (PRS) for age at pubarche, based on the discovered variants, in children from the same cohort. Results We identified one significant variant at the genome-wide level in the full cohort, close to the GALR1 gene (P = 3.81 x 10(-8)). In addition, variants suggestive of association (P < 1 x 10(-5)) were observed in PRLR, PITX1, PTPRD, NR1H4, and BCL11B. Stratifying by sex, we found variants suggestive of association in SERBP1 and CAMTA1/VAMP3 for boys and near ZNF98, TRPC6, and SULT2A1 for girls. We also found significant reductions in age at pubarche in those children with higher PRS for greater DHEAS based on these newly identified variants. Conclusion Our results disclose one variant associated with DHEAS concentrations at the level of genome-wide association study significance, and several variants with a suggestive association that may be involved in the genetic regulation of adrenarche.
引用
收藏
页码:E1727 / E1738
页数:12
相关论文
共 50 条
  • [41] Genome-wide polygenic risk scores for colorectal cancer have implications for risk-based screening
    Max Tamlander
    Bradley Jermy
    Toni T. Seppälä
    Martti Färkkilä
    Elisabeth Widén
    Samuli Ripatti
    Nina Mars
    [J]. British Journal of Cancer, 2024, 130 : 651 - 659
  • [42] Cohort findings in genome-wide association study era
    Han, I.
    Qureshi, A.
    [J]. JOURNAL OF INVESTIGATIVE DERMATOLOGY, 2011, 131 : S40 - S40
  • [43] Genome-wide association study of vitamin D levels in children: replication in the Western Australian Pregnancy Cohort (Raine) study
    D Anderson
    B J Holt
    C E Pennell
    P G Holt
    P H Hart
    J M Blackwell
    [J]. Genes & Immunity, 2014, 15 : 578 - 583
  • [44] Genome-wide association study of vitamin D levels in children: replication in the Western Australian Pregnancy Cohort (Raine) study
    Anderson, D.
    Holt, B. J.
    Pennell, C. E.
    Holt, P. G.
    Hart, P. H.
    Blackwell, J. M.
    [J]. GENES AND IMMUNITY, 2014, 15 (08) : 578 - 583
  • [45] Testing for Polygenic Effects in Genome-Wide Association Studies
    Pan, Wei
    Chen, Yue-Ming
    Wei, Peng
    [J]. GENETIC EPIDEMIOLOGY, 2015, 39 (04) : 306 - 316
  • [46] Genome-wide polygenic scores for common diseases identify individuals with risk equivalent to monogenic mutations
    Khera, Amit V.
    Chaffin, Mark
    Aragam, Krishna G.
    Haas, Mary E.
    Roselli, Carolina
    Choi, Seung Hoan
    Natarajan, Pradeep
    Lander, Eric S.
    Lubitz, Steven A.
    Ellinor, Patrick T.
    Kathiresan, Sekar
    [J]. NATURE GENETICS, 2018, 50 (09) : 1219 - +
  • [47] Genome-Wide Association Study of Serum Selenium Concentrations
    Gong, Jian
    Hsu, Li
    Harrison, Tabitha
    King, Irena B.
    Sturup, Stefan
    Song, Xiaoling
    Duggan, David
    Liu, Yan
    Hutter, Carolyn
    Chanock, Stephen J.
    Eaton, Charles B.
    Marshall, James R.
    Peters, Ulrike
    [J]. NUTRIENTS, 2013, 5 (05): : 1706 - 1718
  • [48] Genome-wide variants and polygenic risk scores for cognitive impairment following blood or marrow transplantation
    Sharafeldin, Noha
    Zhang, Jianqing
    Singh, Purnima
    Bosworth, Alysia
    Chen, Yanjun
    Patel, Sunita K.
    Wang, Xuexia
    Francisco, Liton
    Forman, Stephen J.
    Wong, F. Lennie
    Ojesina, Akinyemi, I
    Bhatia, Smita
    [J]. BONE MARROW TRANSPLANTATION, 2022, 57 (06) : 925 - 933
  • [49] Genome-wide variants and polygenic risk scores for cognitive impairment following blood or marrow transplantation
    Noha Sharafeldin
    Jianqing Zhang
    Purnima Singh
    Alysia Bosworth
    Yanjun Chen
    Sunita K. Patel
    Xuexia Wang
    Liton Francisco
    Stephen J. Forman
    F. Lennie Wong
    Akinyemi I. Ojesina
    Smita Bhatia
    [J]. Bone Marrow Transplantation, 2022, 57 : 925 - 933
  • [50] Genome-wide polygenic scores for common diseases identify individuals with risk equivalent to monogenic mutations
    Amit V. Khera
    Mark Chaffin
    Krishna G. Aragam
    Mary E. Haas
    Carolina Roselli
    Seung Hoan Choi
    Pradeep Natarajan
    Eric S. Lander
    Steven A. Lubitz
    Patrick T. Ellinor
    Sekar Kathiresan
    [J]. Nature Genetics, 2018, 50 : 1219 - 1224