The complete chloroplast genome sequence of Lilium fargesii (Lilium, Liliaceae)

被引：8
|
作者：
Bi, Yu [1 ,2 ,3 ]
Du, Yunpeng [2 ,3 ]
Chen, Xuqing [2 ,3 ]
Yang, Fengping [2 ,3 ]
Xue, Jing [2 ,3 ]
Zhang, Xiuhai [2 ,3 ]
Dong, Ran [1 ]
机构：
[1] Jilin Agr Univ, Sch Hort, 2888 Xincheng St, Changchun 130000, Jilin Province, Peoples R China
[2] Beijing Acad Agr & Forestry Sci, Beijing Agrobiotechnol Res Ctr, 9 Shuguang Garden Rd, Beijing 100097, Peoples R China
[3] Beijing Key Lab Agr Genet Resources & Biotechnol, 9 Shuguang Garden Rd, Beijing 100097, Peoples R China
来源：
CONSERVATION GENETICS RESOURCES | 2016年 / 8卷 / 04期
关键词：
Lilium fargesii; Next generation sequencing; Chloroplast; Genome sequence;
D O I：
10.1007/s12686-016-0585-0
中图分类号：
X176 [生物多样性保护];
学科分类号：
090705 ;
摘要：
Lilium fargesii Franchet is an endangered species endemic to China. In this study, the complete chloroplast genome has been generated from the Next Generation Sequencing. The whole genome is 153,235 bp in length, and includes one large single copy region of 82,217 bp, one small single copy region of 17,038 bp and a pair of inverted repeat region of 26,990 bp. It contains 132 genes, comprising 86 protein-coding genes (78 PCG species), 38 transfer RNA (30 tRNA species) and eight ribosomal RNA genes (four rRNA species). In the maximum likelihood tree, all species of Lilium were clustered into two monophyletic groups with 100 % bootstrap value.
引用
收藏
页码：419 / 422
页数：4
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