Motifs for Processes on Networks\ast

被引:10
|
作者
Schwarze, Alice C. [1 ]
Porter, Mason A. [2 ,3 ]
机构
[1] Dartmouth Coll, Dept Math, Hanover, NH 03755 USA
[2] Univ Calif Los Angeles, Dept Math, Los Angeles, CA 90095 USA
[3] Santa Fe Inst, Santa Fe, NM 87501 USA
来源
基金
英国工程与自然科学研究理事会; 美国国家科学基金会;
关键词
  dynamics on networks; network motifs; walks and paths; stochastic dynamics; subgraph counting; BUILDING-BLOCKS; CONNECTIVITY; NEUROANATOMY; INFORMATION; COMPLEXITY; EVOLUTION; DISCOVERY; MODELS;
D O I
10.1137/20M1361602
中图分类号
O29 [应用数学];
学科分类号
070104 ;
摘要
The study of motifs can help researchers uncover links between the structure and function of networks in biology, sociology, economics, and many other areas. Empirical studies of networks have identified feedback loops, feedforward loops, and several other small structures as ``motifs"" that occur frequently in real-world networks and may contribute by various mechanisms to important functions in these systems. However, these mechanisms are unknown for many of these motifs. We propose to distinguish between ``structure motifs"" (i.e., weakly connected graphlets) in networks and ``process motifs"" (which we define as structured sets of walks) on networks and consider process motifs as building blocks of processes on networks. Using steady-state covariance and steady-state correlation in a multivariate Ornstein-Uhlenbeck process on a network as examples, we demonstrate that distinguishing between structure motifs and process motifs makes it possible to gain quantitative insights into mechanisms that contribute to important functions of dynamical systems on networks.
引用
收藏
页码:2516 / 2557
页数:42
相关论文
共 50 条
  • [31] Link Prediction by Multiple Motifs in Directed Networks
    Liu, Yafang
    Li, Ting
    Xu, Xiaoke
    [J]. IEEE ACCESS, 2020, 8 : 174 - 183
  • [32] Temporal motifs in time-dependent networks
    Kovanen, Lauri
    Karsai, Marton
    Kaski, Kimmo
    Kertesz, Janos
    Saramaki, Jari
    [J]. JOURNAL OF STATISTICAL MECHANICS-THEORY AND EXPERIMENT, 2011,
  • [33] Motifs and modules in fractured functional yeast networks
    Hallinan, J. S.
    Wipat, A.
    [J]. 2007 IEEE SYMPOSIUM ON COMPUTATIONAL INTELLIGENCE IN BIOINFORMATICS AND COMPUTATIONAL BIOLOGY, 2007, : 189 - +
  • [34] Identification of large disjoint motifs in biological networks
    Elhesha, Rasha
    Kahveci, Tamer
    [J]. BMC BIOINFORMATICS, 2016, 17
  • [35] Prediction of proteasome cleavage motifs by neural networks
    Kesmir, C
    Nussbaum, AK
    Schild, H
    Detours, V
    Brunak, S
    [J]. PROTEIN ENGINEERING, 2002, 15 (04): : 287 - 296
  • [36] Motifs and motif generalization in Chinese Word Networks
    Li, Jianyu
    Xiao, Feng
    Zhou, Jie
    Yang, Zhanxin
    [J]. PROCEEDINGS OF THE INTERNATIONAL CONFERENCE ON COMPUTATIONAL SCIENCE, ICCS 2012, 2012, 9 : 550 - 556
  • [37] Dynamic motifs in socio-economic networks
    Zhang, Xin
    Shao, Shuai
    Stanley, H. Eugene
    Havlin, Shlomo
    [J]. EPL, 2014, 108 (05)
  • [38] Information Content of Colored Motifs in Complex Networks
    Adami, Christoph
    Qian, Jifeng
    Rupp, Matthew
    Hintze, Arend
    [J]. ARTIFICIAL LIFE, 2011, 17 (04) : 375 - 390
  • [39] Temporal motifs in patent opposition and collaboration networks
    Liu, Penghang
    Masuda, Naoki
    Kito, Tomomi
    Sariyuce, Ahmet Erdem
    [J]. SCIENTIFIC REPORTS, 2022, 12 (01)
  • [40] Temporal Link Prediction With Motifs for Social Networks
    Qiu, Zhenyu
    Wu, Jia
    Hu, Wenbin
    Du, Bo
    Yuan, Guocai
    Yu, Philip S.
    [J]. IEEE TRANSACTIONS ON KNOWLEDGE AND DATA ENGINEERING, 2023, 35 (03) : 3145 - 3158