ASU-Net plus plus : A nested U-Net with adaptive feature extractions for liver tumor segmentation

被引:28
|
作者
Gao, Qinhan [1 ]
Almekkawy, Mohamed [1 ]
机构
[1] Penn State Univ, Sch Elect Engn & Comp Sci, University Pk, PA 16802 USA
关键词
Ultrasound segmentation; CT segmentation; Tumor segmentation; Deep learning; Convolutional neural network;
D O I
10.1016/j.compbiomed.2021.104688
中图分类号
Q [生物科学];
学科分类号
07 ; 0710 ; 09 ;
摘要
Locating tumors from medical images is of high importance in medical analysis and diagnosis. To tackle the complicated shape of tumors, we propose a multi-leves.l feature extraction neural network to automatically segment the data. Our proposed model is trained and tested with one liver tumor ultrasound and two CT datasets. We employ ++, a collaborative model that uses modified nested U-Net, as our backbone. The model is integrated with dilated dense short skip connections within convolution blocks to further improve the gradient flow and feature preservation. In addition, we modify the original Atrous Spatial Pyramid Pooling (ASPP) to an adaptive pooling structure for better compatibility with nested U-Net. Adaptive ASPP is designed to extract features from different levels and cover the increasing range of feature extraction with regard to the depth of the nested network. Our model showed its advantage in accurately segmenting different tumor sizes with complex edges and was able to generalize with small and diverse datasets. We further improved our model with the newly introduced AdaBelief optimizer and achieved a faster convergence rate. Segmentation results showed that the proposed model outperformed multiple network structures, and achieved a 0.9153 dice coefficient for the ultrasound dataset, a 0.9413 and a 0.9246 dice coefficient for the two CT datasets.
引用
收藏
页数:13
相关论文
共 50 条
  • [2] UNet plus plus : A Nested U-Net Architecture for Medical Image Segmentation
    Zhou, Zongwei
    Siddiquee, Md Mahfuzur Rahman
    Tajbakhsh, Nima
    Liang, Jianming
    DEEP LEARNING IN MEDICAL IMAGE ANALYSIS AND MULTIMODAL LEARNING FOR CLINICAL DECISION SUPPORT, DLMIA 2018, 2018, 11045 : 3 - 11
  • [3] ATTENTION UNET plus plus : A NESTED ATTENTION-AWARE U-NET FOR LIVER CT IMAGE SEGMENTATION
    Li, Chen
    Tan, Yusong
    Chen, Wei
    Luo, Xin
    Gao, Yuanming
    Jia, Xiaogang
    Wang, Zhiying
    2020 IEEE INTERNATIONAL CONFERENCE ON IMAGE PROCESSING (ICIP), 2020, : 345 - 349
  • [4] Exploring the U-Net plus plus Model for Automatic Brain Tumor Segmentation
    Micallef, Neil
    Seychell, Dylan
    Bajada, Claude J.
    IEEE ACCESS, 2021, 9 : 125523 - 125539
  • [5] Brain tumor segmentation based on the U-NET plus plus network with efficientnet encoder
    Chen, Yunyi
    Quan, Lan
    Long, Chao
    Chen, Yuxuan
    Zu, Li
    Huang, Chenxi
    TECHNOLOGY AND HEALTH CARE, 2024, 32 : S183 - S195
  • [6] ASU-Net: U-shape adaptive scale network for mass segmentation in mammograms
    Sun, Kexin
    Xin, Yuelan
    Ma, Yide
    Lou, Meng
    Qi, Yunliang
    Zhu, Jie
    JOURNAL OF INTELLIGENT & FUZZY SYSTEMS, 2022, 42 (04) : 4205 - 4220
  • [7] Vessel Segmentation with Multiscale U-Net plus and CRF
    Sun, Kai
    Wang, Qi
    Meng, Cai
    Guan, Shaoya
    Zong, Rui
    BASIC & CLINICAL PHARMACOLOGY & TOXICOLOGY, 2019, 124 : 31 - 32
  • [8] PGU-net plus : Progressive Growing of U-net plus for Automated Cervical Nuclei Segmentation
    Zhao, Jie
    Dai, Lei
    Zhang, Mo
    Yu, Fei
    Li, Meng
    Li, Hongfeng
    Wang, Wenjia
    Zhang, Li
    MULTISCALE MULTIMODAL MEDICAL IMAGING, MMMI 2019, 2020, 11977 : 51 - 58
  • [9] SCU-Net plus plus : A Nested U-Net Based on Sharpening Filter and Channel Attention Mechanism
    Cui, Hu
    Pan, Haiwei
    Zhang, Kejia
    WIRELESS COMMUNICATIONS & MOBILE COMPUTING, 2022, 2022
  • [10] Two-stage U-Net plus plus for Medical Image Segmentation
    Al Suman, Abdulla
    Sarda, Shubham
    Asikuzzaman, Md
    Webb, Alexandra Louise
    Diana, M. Perriman
    Tahtali, Murat
    Di Ieva, Antonio
    Pickering, Mark R.
    2021 INTERNATIONAL CONFERENCE ON DIGITAL IMAGE COMPUTING: TECHNIQUES AND APPLICATIONS (DICTA 2021), 2021, : 260 - 265