The complete chloroplast genome of Rhizophora stylosa and its phylogenetic implications

被引：7
|
作者：
Li, Cui-Tian [1 ]
Guo, Pu [2 ]
Huang, Hui-Run [3 ]
Pei, Nan-Cai [4 ]
Shi, Miao-Miao [3 ]
Yan, Hai-Fei [3 ]
机构：
[1] Chinese Acad Sci, Marine Environm Engn Ctr, South China Sea Inst Oceanol, Guangzhou, Guangdong, Peoples R China
[2] Chinese Acad Sci, South China Sea Inst Oceanol, State Key Lab Trop Oceanog, Guangzhou, Guangdong, Peoples R China
[3] Chinese Acad Sci, Key Lab Plant Resources Conservat & Sustainable U, South China Bot Garden, Guangzhou 510650, Guangdong, Peoples R China
[4] Chinese Acad Forestry, Res Inst Trop Forestry, Guangzhou, Guangdong, Peoples R China
来源：
MITOCHONDRIAL DNA PART B-RESOURCES | 2019年 / 4卷 / 01期
关键词：
Chloroplast genome; mangroves; Rhizophora stylosa; phylogenetic tree;
D O I：
10.1080/23802359.2018.1547167
中图分类号：
Q3 [遗传学];
学科分类号：
071007 ; 090102 ;
摘要：
Rhizophora stylosa is a true mangrove distributed in the Indo-Pacific region. In this study, the whole chloroplast genome of R. stylosa was assembled and annotated. The chloroplast genome was 164,475 bp in length, consisting of a large single copy (LSC) region of 92,582 bp, a small single copy (SSC) region of 19,243 bp, and two inverted repeat (IR) regions of 26,325 bp. It contained 131 genes, including 85 protein-coding genes, 38 tRNA genes, and eight rRNA genes. The overall GC content was 34.9%. Phylogenetic analysis showed that R. stylosa was sister to Erythroxylum novogranatense.
引用
收藏
页码：374 / 375
页数：2
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