Detection of Streptococcus mutans using Padlock Probe Based on Rolling Circle Amplification (RCA)

被引:3
|
作者
Moreira, Monica [1 ]
Adamoski, Douglas [3 ]
Sun, Jiufeng [4 ]
Najafzadeh, Mohammad Javad [5 ]
Fidelis do Nascimento, Mariana Machado [2 ]
Gomes, Renata Rodrigues [2 ]
Barbieri, Dicler de St'Anna [2 ]
Glienke, Chirlei [3 ]
Klisiowicz, Debora do Rocio [2 ]
Vicente, Vania Aparecida [1 ,2 ]
机构
[1] Univ Fed Parana, Programa Pos Grad Engn Bioproc & Biotecnol, BR-80060000 Curitiba, Parana, Brazil
[2] Univ Fed Parana, Programa Pos Grad Microbiol Parasitol & Patol, BR-80060000 Curitiba, Parana, Brazil
[3] Univ Fed Parana, Dept Genet, BR-80060000 Curitiba, Parana, Brazil
[4] China & Univ Farmaceut, Inst Prov Saude Publ Guangdong, Ctr Prov Controle & Prevencao Doencas Guangdong, Escola Ciencias Vida & Tecnol, Nanjing, Jiangsu, Peoples R China
[5] Univ Mashhad Ciencias Med, Dept Parasitol & Micol, Fac Med, Mashhad, Iran
关键词
Padlock probe; RCA; Streptococcus mutans; REAL-TIME PCR; RAPID IDENTIFICATION; ORAL STREPTOCOCCI; SEQUENCE-ANALYSIS; DNA; DIFFERENTIATION; ADHERENCE;
D O I
10.1590/S1516-8913201502762
中图分类号
Q [生物科学];
学科分类号
07 ; 0710 ; 09 ;
摘要
The aim of this study was to develop and evaluate a padlock probe based on the Rolling Circle Amplification (RCA), which targeted to 16S-23S rDNA region of S. mutans. The specificity of developed padlock probe was tested for DNA within a panel strains, including S. mutans isolated from the saliva and reference strains of the genus Streptococcus, as well as total DNA samples of biofilm and saliva. The results were positive either for DNA samples of S. mutans or DNA samples recovered from the biofilm and saliva revealing the specificity of designed padlock probe. The padlock probe based on the RCA was proved to be an effective, reproducible method for S. mutans detection and demonstrated the possibility of a rapid detection and accurate identification of S. mutans infection.
引用
收藏
页码:54 / 60
页数:7
相关论文
共 50 条
  • [21] A universal fluorescence biosensor based on rolling circle amplification and locking probe for DNA detection
    Fang, Ying
    Nie, Lanxin
    Wang, Suqin
    Liu, Shiwen
    Li, Hongbo
    Yu, Ruqin
    MICROCHIMICA ACTA, 2024, 191 (07)
  • [22] Amplification of padlock probes for DNA diagnostics by cascade rolling circle amplification or the polymerase chain reaction
    Thomas, DC
    Nardone, GA
    Randall, SK
    ARCHIVES OF PATHOLOGY & LABORATORY MEDICINE, 1999, 123 (12) : 1170 - 1176
  • [23] A fishhook probe-based rolling circle amplification (FP-RCA) assay for efficient isolation and detection of microRNA without total RNA extraction
    Lu, Wei
    Wang, Yusheng
    Song, Shanshan
    Chen, Chaoyu
    Yao, Bo
    Wang, Min
    ANALYST, 2018, 143 (20) : 5046 - 5053
  • [24] Detection of mRNA in situ using rolling circle amplification
    Petibone, DM
    Thomas, RA
    Itoh, S
    Tucker, JD
    ENVIRONMENTAL AND MOLECULAR MUTAGENESIS, 2004, 44 (03) : 220 - 220
  • [25] Rapid identification of Fusarium graminearum species complex using Rolling Circle Amplification (RCA)
    Davari, Mahdi
    van Diepeningen, Anne D.
    Babai-Ahari, Assadollah
    Arzanlou, Mahdi
    Najafzadeh, Mohammed Javad
    van der Lee, Theo A. J.
    de Hoog, G. Sybren
    JOURNAL OF MICROBIOLOGICAL METHODS, 2012, 89 (01) : 63 - 70
  • [26] Analysis of CpG Island Methylation Using Rolling Circle Amplification (RCA) Product Microarray
    Zhao, Hong
    Ma, Xiaodong
    Li, Minli
    Zhou, Dongrui
    Xiao, Pengfeng
    Lu, Zuhong
    JOURNAL OF BIOMEDICAL NANOTECHNOLOGY, 2011, 7 (02) : 292 - 299
  • [27] Protein detection based on rolling circle amplification sensors
    Shi, Haixia
    Cui, Jingjie
    Sulemana, Husseini
    Wang, Wunian
    Gao, Li
    LUMINESCENCE, 2021, 36 (04) : 842 - 848
  • [28] A Novel Rolling Circle Amplification-Based Detection of SARS-CoV-2 with Multi-Region Padlock Hybridization
    Kumari, Rajesh
    Lim, Ji Won
    Sullivan, Matthew Ryan
    Malampy, Rachel
    Baush, Connor
    Smolina, Irina
    Robin, Howard
    Demidov, Vadim V.
    Ugolini, Giovanni Stefano
    Auclair, Jared R.
    Konry, Tania
    DIAGNOSTICS, 2022, 12 (09)
  • [29] Mechanistic investigation of bead-based padlock rolling circle amplification under molecular crowding conditions
    Sasaki, Naoki
    Kase, Chikako
    Chou, Masaki
    Nakazato, Genki
    Sato, Kae
    ANALYTICAL BIOCHEMISTRY, 2020, 593
  • [30] Diffractometric Detection of Proteins Using Microbead-Based Rolling Circle Amplification
    Lee, Joonhyung
    Icoz, Kutay
    Roberts, Ana
    Ellington, Andrew D.
    Savran, Cagri A.
    ANALYTICAL CHEMISTRY, 2010, 82 (01) : 197 - 202