Comparison of CE-MS and LC-MS analyses of avian eggshell matrix proteins

CE-MS and HPLC-MS methods were developed and compared for the analysis of insoluble proteins in an avian eggshell matrix. The eggshell was gradually decalcified to obtain four distinct layers (cuticle, two palisade and a mammillary layer). The insoluble proteinaceous films from these layers were chemically and/or enzymatically splitted with CNBr/trypsin and proteinase K. The generated peptides were separated by CE and HPLC on-line coupled to MS detection. Capillary electrophoresis (CE) was coupled to an ion-trap electrospray ionization mass spectrometer (Agilent LC-MSD Trap XCT-Ultra) using a grounded needle carrying a flow of sheath liquid (5 mM ammonium acetate/2-propanol, 1:1, at flow-rate 3 mu L min(-1)). Five main proteins were identified: ovocleidin-116, ovocalyxin-32, ovocalyxin-36, ovocleidin- 17 and ovalbumin. The distribution of these proteins in the eggshell was found to be dependent on the location/layer. In the outermost layer (the cuticle layer) the dominant protein is ovocalyxin-32; ovocleidin-116 is distributed throughout all layers while ovalbumin is present only in the internal mammillary layer. The CE-MS peptide maps of eggshell proteins were compared to the HPLC-MS ones, and a different mechanism of separation (migration/elution order) was demonstrated for both methods.