Mylodon darwinii DNA sequences from ancient fecal hair shafts

被引:16
|
作者
Clack, Andrew A. [1 ]
MacPhee, Ross D. E. [4 ]
Poinar, Hendrik N. [1 ,2 ,3 ]
机构
[1] McMaster Univ, McMaster Ancient DNA Ctr, Hamilton, ON L8S 4L9, Canada
[2] McMaster Univ, Dept Anthropol, Hamilton, ON L8S 4L9, Canada
[3] McMaster Univ, Dept Pathol & Mol Med, Hamilton, ON L8S 4L9, Canada
[4] Amer Museum Nat Hist, New York, NY 10024 USA
基金
加拿大自然科学与工程研究理事会;
关键词
Ancient DNA; Coprolites; Fecal hair; Mylodon darwinii; EXTINCT GROUND SLOTH; MOLECULAR ANALYSIS; GENOME; PHYLOGENY; DIET;
D O I
10.1016/j.aanat.2011.05.001
中图分类号
R602 [外科病理学、解剖学]; R32 [人体形态学];
学科分类号
100101 ;
摘要
Preserved hair has been increasingly used as an ancient DNA source in high throughput sequencing endeavors, and it may actually offer several advantages compared to more traditional ancient DNA substrates like bone. However, cold environments have yielded the most informative ancient hair specimens, while its preservation, and thus utility, in temperate regions is not well documented. Coprolites could represent a previously underutilized preservation substrate for hairs, which, if present therein, represent macroscopic packages of specific cells that are relatively simple to separate, clean and process. In this pilot study, we report amplicons 147-152 base pairs in length (w/primers) from hair shafts preserved in a south Chilean coprolite attributed to Darwin's extinct ground sloth, Mylodon darwinii. Our results suggest that hairs preserved in coprolites from temperate cave environments can serve as an effective source of ancient DNA. This bodes well for potential molecular-based population and phylogeographic studies on sloths, several species of which have been understudied despite leaving numerous coprolites in caves across of the Americas. (C) 2011 Published by Elsevier GmbH.
引用
收藏
页码:26 / 30
页数:5
相关论文
共 50 条
  • [31] Assessing the fidelity of ancient DNA sequences amplified from nuclear genes
    Binladen, J
    Wiuf, C
    Gilbert, MTP
    Bunce, M
    Barnett, R
    Larson, G
    Greenwood, AD
    Haile, J
    Ho, SYW
    Hansen, AJ
    Willerslev, E
    GENETICS, 2006, 172 (02) : 733 - 741
  • [32] RECONSTRUCTING HUMAN HISTORY FROM ANCIENT AND MODERN DNA-SEQUENCES
    PAABO, S
    AMERICAN JOURNAL OF HUMAN GENETICS, 1991, 49 (04) : 64 - 64
  • [33] A reanalysis of the ancient mitochondrial DNA sequences recovered from neandertal bones
    Gutiérrez, G
    Sánchez, D
    Marín, A
    MOLECULAR BIOLOGY AND EVOLUTION, 2002, 19 (08) : 1359 - 1366
  • [34] Extending the spectrum of DNA sequences retrieved from ancient bones and teeth
    Glocke, Isabelle
    Meyer, Matthias
    GENOME RESEARCH, 2017, 27 (07) : 1230 - 1237
  • [35] Analysis of polymorphic nuclear markers in DNA extracted from archived Native American hair shafts.
    Flournoy, LE
    AMERICAN JOURNAL OF PHYSICAL ANTHROPOLOGY, 1999, : 129 - 129
  • [36] Thoracic member (pectoral girdle and forelimb) bones of Mylodon darwinii Owen (Xenarthra, Mylodontidae) from the Late Pleistocene of Central Argentina and their phylogenetic implications
    José A. Haro
    Adan A. Tauber
    Jerónimo M. Krapovickas
    PalZ, 2017, 91 : 439 - 457
  • [37] Thoracic member (pectoral girdle and forelimb) bones of Mylodon darwinii Owen (Xenarthra, Mylodontidae) from the Late Pleistocene of Central Argentina and their phylogenetic implications
    Haro, Jose A.
    Tauber, Adan A.
    Krapovickas, Jeronimo M.
    PALZ, 2017, 91 (03) : 439 - 457
  • [38] Genetics - Ancient DNA from frozen hair may untangle Eskimo roots
    Balter, Michael
    SCIENCE, 2008, 320 (5880) : 1146 - 1147
  • [39] An enhanced DNA amplification method to detect the species origins of the rootless hair shafts
    Chen, Chong
    Lin, Yuan
    Tao, Ruiyang
    Xia, Ruocheng
    Zhang, Xiaochun
    Zhang, Jingyi
    Yang, Zihao
    Li, Chengtao
    Zhang, Suhua
    FORENSIC SCIENCE INTERNATIONAL GENETICS SUPPLEMENT SERIES, 2019, 7 (01) : 647 - 648
  • [40] Mitochondrial DNA in human hair shafts – existence of intra-individual differences?
    J. Hühne
    H. Pfeiffer
    K. Waterkamp
    B. Brinkmann
    International Journal of Legal Medicine, 1999, 112 : 172 - 175