Genetic diversities of 21 non-CODIS autosomal STRs of a Chinese Tibetan ethnic minority group in Lhasa

被引:39
|
作者
Zhu, Bo-feng [1 ,2 ,3 ]
Shen, Chun-mei [2 ]
Wang, Hong-dan [3 ]
Yang, Guang [4 ]
Yan, Jiang-wei [5 ]
Qin, Hai-xia [6 ]
Guo, Jian-xin [7 ]
Huang, Jing-feng [3 ]
Jing, Hang [3 ]
Liu, Xin-she [1 ,3 ]
机构
[1] Xi An Jiao Tong Univ, Minist Educ, Key Lab Environm & Gene Related Dis, Xian 710061, Shaanxi, Peoples R China
[2] Blood Ctr Shaanxi Prov, Xian 710061, Shaanxi, Peoples R China
[3] Xi An Jiao Tong Univ, Sch Med, Dept Forens Sci, Xian 710061, Shaanxi, Peoples R China
[4] Med Coll Georgia, Vasc Biol Ctr, Augusta, GA 30912 USA
[5] Chinese Acad Sci, Beijing Inst Genom, Beijing 100029, Peoples R China
[6] Med Coll Georgia, Inst Mol Med & Genet, Augusta, GA 30912 USA
[7] Xi An Jiao Tong Univ, Sch Med, Hosp 1, Med Imaging Ctr, Xian 710061, Shaanxi, Peoples R China
基金
中国国家自然科学基金;
关键词
Short tandem repeat (STR); Chinese Tibetan ethnic minority group; Genetic polymorphisms; AGCU 21+1 STR kit; QINGHAI PROVINCE; POPULATION-DATA; LOCI; DNA;
D O I
10.1007/s00414-010-0519-4
中图分类号
DF [法律]; D9 [法律]; R [医药、卫生];
学科分类号
0301 ; 10 ;
摘要
In the present study, we investigated 21 short tandem repeat (STR) loci (D6S474, D12ATA63, D22S1045, D10S1248, D1S1677, D11S4463, D1S1627, D3S4529, D2S441, D6S1017, D4S2408, D19S433, D17S1301, D1GATA113, D18S853, D20S482, D14S1434, D9S1122, D2S1776, D10S1435, D5S2500), which are not included in the Combined DNA Index System and Amelogenin locus in 104 randomly selected healthy autochthonous individuals from the Tibetan ethnic minority group residing in the Lhasa region, Tibet Autonomous Region of China. Allelic frequencies, common forensic statistical parameters, and the Hardy-Weinberg equilibrium in this population were calculated with a modified PowerState V12.xls. A total of 143 alleles were found in the Tibetan group with corresponding allelic frequencies ranging from 0.005 to 0.582. The observed heterozygosity, the expected heterozygosity, the power of discrimination, the power of exclusion, and the polymorphic information content ranged from 0.615 to 0.817, 0.559 to 0.787, 0.727 to 0.926, 0.310 to 0.632, and 0.488 to 0.760, respectively. Chi-square tests of the observed genotype frequencies and expected genotype frequencies in the samples showed no departure from the Hardy-Weinberg equilibrium at all loci except for D5S2500. Our results demonstrate that these 21 STRs are highly polymorphic and suitable for anthropological research, population genetics, and forensic paternity testing and human individual identification in this region, and can enrich Chinese ethnical genetic informational resources.
引用
收藏
页码:581 / 585
页数:5
相关论文
共 50 条
  • [21] Genetic polymorphism of 21 non-CODIS STR loci for Han population in Hunan Province, China
    Guo, Juanjuan
    Liu, Ying
    Peng, Yulong
    Fu, Yong
    Yun, Libing
    Ding, Zhiyu
    Hu, Zhenyu
    Chen, Yang
    Cai, Jifeng
    Zha, Lagabaiyila
    FORENSIC SCIENCE INTERNATIONAL-GENETICS, 2015, 17 : 81 - 82
  • [22] Comprehensive analyses for genetic diversities of 19 autosomal STRs in Chinese Kazak group and its phylogenetic relationships with other continental populations
    Wang, Yijie
    Jin, Xiaoye
    Zhang, Wenqing
    Cui, Wei
    Kong, Tingting
    Chen, Chong
    Guo, Yuxin
    Meng, Haotian
    Zhu, Bofeng
    FORENSIC SCIENCES RESEARCH, 2022, 7 (02) : 163 - 171
  • [23] Genetic polymorphism of 21 non-CODIS STR loci for Guangdong (Southern China) Han population
    Lu, Huijie
    Qiu, Pingming
    Liu, Chao
    Du, Weian
    Chen, Ling
    FORENSIC SCIENCE INTERNATIONAL-GENETICS, 2017, 27 : 180 - 181
  • [24] Forensic effectiveness and genetic distribution of 20 non-CODIS STRs and D3S1358 in Guangdong Han population
    Peng, Hanhui
    Li, Xiaopeng
    Yao, Ting
    Huang, Hongyan
    Xiao, Cheng
    Wu, Weibin
    Chen, Ling
    INTERNATIONAL JOURNAL OF LEGAL MEDICINE, 2020, 134 (04) : 1319 - 1321
  • [25] 12 Y-STRs haplotypes in Chinese Naxi ethnic minority group
    Xin, Na
    Chen, Teng
    Yu, Bing
    Li, Shengbin
    FORENSIC SCIENCE INTERNATIONAL, 2008, 174 (2-3) : 244 - 248
  • [26] Forensic effectiveness and genetic distribution of 20 non-CODIS STRs and D3S1358 in Guangdong Han population
    Hanhui Peng
    Xiaopeng Li
    Ting Yao
    Hongyan Huang
    Cheng Xiao
    Weibin Wu
    Ling Chen
    International Journal of Legal Medicine, 2020, 134 : 1319 - 1321
  • [27] RETRACTED: Genetic polymorphism and phylogenetic analyses of 21 non-CODIS STR loci in a Chinese Han population from Shanghai (Retracted Article)
    Zhou, Zhihan
    Shao, Chengchen
    Xie, Jianhui
    Xu, Hongmei
    Liu, Yidong
    Zhou, Yueqin
    Liu, Zhiping
    Zhao, Ziqin
    Tang, Qiqun
    Sun, Kuan
    MOLECULAR GENETICS & GENOMIC MEDICINE, 2020, 8 (02):
  • [28] Genetic structure and polymorphism analysis of Xinjiang Hui ethnic minority based on 21 STRs
    Lan, Qiong
    Chen, Jiangang
    Guo, Yuxin
    Xie, Tong
    Fang, Yating
    Jin, Xiaoye
    Cui, Wei
    Zhou, Yongsong
    Zhu, Bofeng
    MOLECULAR BIOLOGY REPORTS, 2018, 45 (02) : 99 - 108
  • [29] Genetic structure and polymorphism analysis of Xinjiang Hui ethnic minority based on 21 STRs
    Qiong Lan
    Jiangang Chen
    Yuxin Guo
    Tong Xie
    Yating Fang
    Xiaoye Jin
    Wei Cui
    Yongsong Zhou
    Bofeng Zhu
    Molecular Biology Reports, 2018, 45 : 99 - 108
  • [30] Population genetics for Y-STRs haplotypes of Chinese Ewenki ethnic minority group
    Zhu, BF
    Shen, CM
    Gong, ZZ
    Zhu, J
    Yang, G
    Wu, HY
    Li, XS
    He, YF
    Zhao, J
    Liu, Y
    JOURNAL OF FORENSIC SCIENCES, 2005, 50 (04) : 969 - 971