Genetic diversities of 21 non-CODIS autosomal STRs of a Chinese Tibetan ethnic minority group in Lhasa

被引:39
|
作者
Zhu, Bo-feng [1 ,2 ,3 ]
Shen, Chun-mei [2 ]
Wang, Hong-dan [3 ]
Yang, Guang [4 ]
Yan, Jiang-wei [5 ]
Qin, Hai-xia [6 ]
Guo, Jian-xin [7 ]
Huang, Jing-feng [3 ]
Jing, Hang [3 ]
Liu, Xin-she [1 ,3 ]
机构
[1] Xi An Jiao Tong Univ, Minist Educ, Key Lab Environm & Gene Related Dis, Xian 710061, Shaanxi, Peoples R China
[2] Blood Ctr Shaanxi Prov, Xian 710061, Shaanxi, Peoples R China
[3] Xi An Jiao Tong Univ, Sch Med, Dept Forens Sci, Xian 710061, Shaanxi, Peoples R China
[4] Med Coll Georgia, Vasc Biol Ctr, Augusta, GA 30912 USA
[5] Chinese Acad Sci, Beijing Inst Genom, Beijing 100029, Peoples R China
[6] Med Coll Georgia, Inst Mol Med & Genet, Augusta, GA 30912 USA
[7] Xi An Jiao Tong Univ, Sch Med, Hosp 1, Med Imaging Ctr, Xian 710061, Shaanxi, Peoples R China
基金
中国国家自然科学基金;
关键词
Short tandem repeat (STR); Chinese Tibetan ethnic minority group; Genetic polymorphisms; AGCU 21+1 STR kit; QINGHAI PROVINCE; POPULATION-DATA; LOCI; DNA;
D O I
10.1007/s00414-010-0519-4
中图分类号
DF [法律]; D9 [法律]; R [医药、卫生];
学科分类号
0301 ; 10 ;
摘要
In the present study, we investigated 21 short tandem repeat (STR) loci (D6S474, D12ATA63, D22S1045, D10S1248, D1S1677, D11S4463, D1S1627, D3S4529, D2S441, D6S1017, D4S2408, D19S433, D17S1301, D1GATA113, D18S853, D20S482, D14S1434, D9S1122, D2S1776, D10S1435, D5S2500), which are not included in the Combined DNA Index System and Amelogenin locus in 104 randomly selected healthy autochthonous individuals from the Tibetan ethnic minority group residing in the Lhasa region, Tibet Autonomous Region of China. Allelic frequencies, common forensic statistical parameters, and the Hardy-Weinberg equilibrium in this population were calculated with a modified PowerState V12.xls. A total of 143 alleles were found in the Tibetan group with corresponding allelic frequencies ranging from 0.005 to 0.582. The observed heterozygosity, the expected heterozygosity, the power of discrimination, the power of exclusion, and the polymorphic information content ranged from 0.615 to 0.817, 0.559 to 0.787, 0.727 to 0.926, 0.310 to 0.632, and 0.488 to 0.760, respectively. Chi-square tests of the observed genotype frequencies and expected genotype frequencies in the samples showed no departure from the Hardy-Weinberg equilibrium at all loci except for D5S2500. Our results demonstrate that these 21 STRs are highly polymorphic and suitable for anthropological research, population genetics, and forensic paternity testing and human individual identification in this region, and can enrich Chinese ethnical genetic informational resources.
引用
收藏
页码:581 / 585
页数:5
相关论文
共 50 条
  • [1] Genetic diversities of 21 non-CODIS autosomal STRs of a Chinese Tibetan ethnic minority group in Lhasa
    Bo-feng Zhu
    Chun-mei Shen
    Hong-dan Wang
    Guang Yang
    Jiang-wei Yan
    Hai-xia Qin
    Jian-xin Guo
    Jing-feng Huang
    Hang Jing
    Xin-she Liu
    International Journal of Legal Medicine, 2011, 125 : 581 - 585
  • [2] Genetic polymorphism of 21 non-CODIS STR loci in the Chinese Mongolian ethnic minority
    Zha, Lagabaiyila
    Liu, Ying
    Guo, Yadong
    Li, Jun
    Wang, Ke
    Geng, Kun
    Liao, Qiao
    Liu, Jinshan
    Chen, Hanchun
    Cai, Jifeng
    FORENSIC SCIENCE INTERNATIONAL-GENETICS, 2014, 9 : E32 - E33
  • [3] Population data of 21 non-CODIS STR loci in the Chinese Uygur ethnic minority
    Song, Feng
    Luo, Hai-bo
    Hou, Yi-ping
    FORENSIC SCIENCE INTERNATIONAL-GENETICS, 2014, 13 : E1 - E2
  • [4] Genetic diversity and phylogenetic characteristics of Chinese Tibetan and Yi minority ethnic groups revealed by non-CODIS STR markers
    He, Guanglin
    Wang, Zheng
    Zou, Xing
    Chen, Xu
    Liu, Jing
    Wang, Mengge
    Hou, Yiping
    SCIENTIFIC REPORTS, 2018, 8
  • [5] Genetic diversity and phylogenetic characteristics of Chinese Tibetan and Yi minority ethnic groups revealed by non-CODIS STR markers
    Guanglin He
    Zheng Wang
    Xing Zou
    Xu Chen
    Jing Liu
    Mengge Wang
    Yiping Hou
    Scientific Reports, 8
  • [6] Allele frequencies of nine non-CODIS STR loci in Chinese Uyghur ethnic minority group
    Li, Siyue
    Zhou, Yi
    Cheng, Zhao
    Wang, Jun
    Song, Xingbo
    Ye, Yuanxin
    Ying, BinWu
    An Zhenmei
    FORENSIC SCIENCE INTERNATIONAL-GENETICS, 2012, 6 (01) : E11 - E12
  • [7] Genetic Diversity and Phylogenetic Differentiation of Southwestern Chinese Han: a comprehensive and comparative analysis on 21 non-CODIS STRs
    Guanglin He
    Zheng Wang
    Mengge Wang
    Yiping Hou
    Scientific Reports, 7
  • [8] Genetic Diversity and Phylogenetic Differentiation of Southwestern Chinese Han: a comprehensive and comparative analysis on 21 non-CODIS STRs
    He, Guanglin
    Wang, Zheng
    Wang, Mengge
    Hou, Yiping
    SCIENTIFIC REPORTS, 2017, 7
  • [9] Genetic diversities of 20 novel autosomal STRs in Chinese Xibe ethnic group and its genetic relationships with neighboring populations
    Meng, Hao-Tian
    Zhang, Li-Ping
    Wu, Hua
    Yang, Chun-Hua
    Chen, Jian-Gang
    Wang, Yan
    Yan, Jiang-Wei
    Wang, Hong-Dan
    Zhang, Yu-Dang
    Liu, Wen-Juan
    Zhu, Bo-Feng
    GENE, 2015, 557 (02) : 222 - 228
  • [10] Genetic analysis of 17 Y-chromosomal STRs haplotypes of Chinese Tibetan ethnic minority group
    Zhou Yi
    Wang Jun
    Song XingBo
    Lu XiaoJun
    Ding Liu
    Ying BinWu
    LEGAL MEDICINE, 2010, 12 (02) : 108 - 111