m6A RNA methylation regulators contribute to malignant progression and have clinical prognostic impact in gliomas

被引:173
|
作者
Chai, Rui-Chao [1 ,3 ,7 ]
Wu, Fan [1 ,7 ]
Wang, Qi-Xue [4 ,5 ,6 ,7 ]
Zhang, Shu [4 ,5 ,6 ]
Zhang, Ke-Nan [1 ,7 ]
Liu, Yu-Qing [1 ,7 ]
Zhao, Zheng [1 ,7 ]
Jiang, Tao [1 ,2 ,3 ,7 ]
Wang, Yong-Zhi [1 ,2 ,3 ,7 ]
Kang, Chun-Sheng [4 ,5 ,6 ,7 ,8 ,9 ]
机构
[1] Capital Med Univ, Beijing Tiantan Hosp, Beijing Neurosurg Inst, Dept Mol Neuropathol, Beijing 100160, Peoples R China
[2] Capital Med Univ, Beijing Tiantan Hosp, Dept Neurosurg, Beijing 100160, Peoples R China
[3] China Natl Clin Res Ctr Neurol Dis, Beijing, Peoples R China
[4] Tianjin Med Univ Gen Hosp, Tianjin Neurol Inst, Dept Neurosurg, Lab Neurooncol, Tianjin 300052, Peoples R China
[5] Minist Educ, Key Lab Neurotrauma Variat & Regenerat, Tianjin 300052, Peoples R China
[6] Tianjin Municipal Govt, Tianjin 300052, Peoples R China
[7] Chinese Glioma Genome Atlas Network CGGA, Beijing, Peoples R China
[8] Affiliated Canc Hosp, Guangzhou 510095, Guangdong, Peoples R China
[9] Inst Guangzhou Med Univ, Guangzhou 510095, Guangdong, Peoples R China
来源
AGING-US | 2019年 / 11卷 / 04期
基金
中国国家自然科学基金;
关键词
RNA modification; methyltransferase; demethylases; epigenetics; prognostic signature; PRE-MESSENGER-RNAS; STEM-LIKE CELLS; N-6-METHYLADENOSINE M(6)A; GLIOBLASTOMA; EXPRESSION; SIGNATURE; SURVIVAL;
D O I
10.18632/aging.101829
中图分类号
Q2 [细胞生物学];
学科分类号
071009 ; 090102 ;
摘要
N6-methyladenosine (m(6)A) RNA methylation, associated with cancer initiation and progression, is dynamically regulated by the m(6)A RNA methylation regulators ("writers", "erasers" and "readers"). Here, we demonstrate that most of the thirteen main m(6)A RNA methylation regulators are differentially expressed among gliomas stratified by different clinicopathological features in 904 gliomas. We identified two subgroups of gliomas (RM1/2) by applying consensus clustering to m(6)A RNA methylation regulators. Compared with the RM1 subgroup, the RM2 subgroup correlates with a poorer prognosis, higher WHO grade, and lower frequency of IDH mutation. Moreover, the hallmarks of epithelial-mesenchymal transition and TNF alpha signaling via NF-kappa B are also significantly enriched in the RM2 subgroup. This finding indicates that m(6)A RNA methylation regulators are closely associated with glioma malignancy. Based on this finding, we derived a risk signature, using seven m(6)A RNA methylation regulators, that is not only an independent prognostic marker but can also predict the clinicopathological features of gliomas. Moreover, m(6)A regulators are associated with the mesenchymal subtype and TMZ sensitivity in GBM. In conclusion, m(6)A RNA methylation regulators are crucial participants in the malignant progression of gliomas and are potentially useful for prognostic stratification and treatment strategy development.
引用
收藏
页码:1204 / 1225
页数:22
相关论文
共 50 条
  • [41] Changes in m6A RNA methylation contribute to heart failure progression by modulating translation
    Berulava, Tea
    Buchholz, Eric
    Elerdashvili, Vakhtang
    Pena, Tonatiuh
    Islam, Rezaul
    Lbik, Dawid
    Mohamed, Belal A.
    Renner, Andre
    von Lewinski, Dirk
    Sacherer, Michael
    Bohnsack, Katherine E.
    Bohnsack, Markus T.
    Jain, Gaurav
    Capece, Vincenzo
    Cleve, Nicole
    Burkhardt, Susanne
    Hasenfuss, Gerd
    Fischer, Andre
    Toischer, Karl
    EUROPEAN JOURNAL OF HEART FAILURE, 2020, 22 (01) : 54 - 66
  • [42] RNA m6A methylation regulators in lung neuroendocrine neoplasms
    Ibanez-Costa, A.
    Garcia Vioque, V.
    Blazquez-Encinas, R.
    Montilla, Moreno M. T.
    Pedraza-Arevalo, S.
    Agraz-Doblas, A. M.
    Foll, M.
    Fernandez-Cuesta, L.
    Castano, J. P.
    JOURNAL OF NEUROENDOCRINOLOGY, 2023, 35 : 25 - 25
  • [43] RNA m6A methylation regulators in endometrial cancer (Review)
    Shen, Siyi
    Guo, Jialu
    Lv, Nengyuan
    Chen, Qianying
    Tong, Jinyi
    INTERNATIONAL JOURNAL OF ONCOLOGY, 2022, 61 (06)
  • [44] The role of regulators of RNA m6A methylation in lung cancer
    Zhang, Qicheng
    Xu, Ke
    GENES & DISEASES, 2023, 10 (02) : 495 - 504
  • [45] The Identification of Critical m6A RNA Methylation Regulators as Malignant Prognosis Factors in Prostate Adenocarcinoma
    Xu, Jiaju
    Liu, Yuenan
    Liu, Jingchong
    Xu, Tianbo
    Cheng, Gong
    Shou, Yi
    Tong, Junwei
    Liu, Lilong
    Zhou, Lijie
    Xiao, Wen
    Xiong, Zhiyong
    Yuan, Changfei
    Chen, Zhixian
    Liu, Di
    Yang, Hongmei
    Liang, Huageng
    Chen, Ke
    Zhang, Xiaoping
    FRONTIERS IN GENETICS, 2020, 11
  • [46] Effects of m6A RNA methylation regulators on endometrial cancer
    Zhang, Yanli
    Yang, Yingjie
    JOURNAL OF CLINICAL LABORATORY ANALYSIS, 2021, 35 (09)
  • [47] Exploration of the Role of m6 A RNA Methylation Regulators in Malignant Progression and Clinical Prognosis of Ovarian Cancer
    Wei, Qinglv
    Yang, Dan
    Liu, Xiaoyi
    Zhao, Hongyan
    Yang, Yu
    Xu, Jing
    Liu, Tao
    Yi, Ping
    FRONTIERS IN GENETICS, 2021, 12
  • [48] Construction and validation of m6A RNA methylation regulators associated prognostic model for gastrointestinal cancer
    Miao, Yandong
    Su, Bin
    Tang, Xiaolong
    Wang, Jiangtao
    Quan, Wuxia
    Chen, Yonggang
    Mi, Denghai
    IET SYSTEMS BIOLOGY, 2022, 16 (02) : 59 - 71
  • [49] Gene Expression Profile and Prognostic Value of m6A RNA Methylation Regulators in Hepatocellular Carcinoma
    Chang, Xian
    Lv, Yang-Fan
    He, Jing
    Cao, Ya
    Li, Chang-Qing
    Guo, Qiao-Nan
    JOURNAL OF HEPATOCELLULAR CARCINOMA, 2021, 8 : 85 - 101
  • [50] Expression of m6A RNA Methylation Regulators and Their Clinical Predictive Value in Intrahepatic Cholangiocarcinoma
    Wei, Feng
    Zhang, Jia-Ning
    Zhao, Yu-Qing
    Lyu, Hongwei
    Chen, Fengyuan
    FRONTIERS IN BIOSCIENCE-LANDMARK, 2023, 28 (06):