m6A RNA methylation regulators contribute to malignant progression and have clinical prognostic impact in gliomas

被引:173
|
作者
Chai, Rui-Chao [1 ,3 ,7 ]
Wu, Fan [1 ,7 ]
Wang, Qi-Xue [4 ,5 ,6 ,7 ]
Zhang, Shu [4 ,5 ,6 ]
Zhang, Ke-Nan [1 ,7 ]
Liu, Yu-Qing [1 ,7 ]
Zhao, Zheng [1 ,7 ]
Jiang, Tao [1 ,2 ,3 ,7 ]
Wang, Yong-Zhi [1 ,2 ,3 ,7 ]
Kang, Chun-Sheng [4 ,5 ,6 ,7 ,8 ,9 ]
机构
[1] Capital Med Univ, Beijing Tiantan Hosp, Beijing Neurosurg Inst, Dept Mol Neuropathol, Beijing 100160, Peoples R China
[2] Capital Med Univ, Beijing Tiantan Hosp, Dept Neurosurg, Beijing 100160, Peoples R China
[3] China Natl Clin Res Ctr Neurol Dis, Beijing, Peoples R China
[4] Tianjin Med Univ Gen Hosp, Tianjin Neurol Inst, Dept Neurosurg, Lab Neurooncol, Tianjin 300052, Peoples R China
[5] Minist Educ, Key Lab Neurotrauma Variat & Regenerat, Tianjin 300052, Peoples R China
[6] Tianjin Municipal Govt, Tianjin 300052, Peoples R China
[7] Chinese Glioma Genome Atlas Network CGGA, Beijing, Peoples R China
[8] Affiliated Canc Hosp, Guangzhou 510095, Guangdong, Peoples R China
[9] Inst Guangzhou Med Univ, Guangzhou 510095, Guangdong, Peoples R China
来源
AGING-US | 2019年 / 11卷 / 04期
基金
中国国家自然科学基金;
关键词
RNA modification; methyltransferase; demethylases; epigenetics; prognostic signature; PRE-MESSENGER-RNAS; STEM-LIKE CELLS; N-6-METHYLADENOSINE M(6)A; GLIOBLASTOMA; EXPRESSION; SIGNATURE; SURVIVAL;
D O I
10.18632/aging.101829
中图分类号
Q2 [细胞生物学];
学科分类号
071009 ; 090102 ;
摘要
N6-methyladenosine (m(6)A) RNA methylation, associated with cancer initiation and progression, is dynamically regulated by the m(6)A RNA methylation regulators ("writers", "erasers" and "readers"). Here, we demonstrate that most of the thirteen main m(6)A RNA methylation regulators are differentially expressed among gliomas stratified by different clinicopathological features in 904 gliomas. We identified two subgroups of gliomas (RM1/2) by applying consensus clustering to m(6)A RNA methylation regulators. Compared with the RM1 subgroup, the RM2 subgroup correlates with a poorer prognosis, higher WHO grade, and lower frequency of IDH mutation. Moreover, the hallmarks of epithelial-mesenchymal transition and TNF alpha signaling via NF-kappa B are also significantly enriched in the RM2 subgroup. This finding indicates that m(6)A RNA methylation regulators are closely associated with glioma malignancy. Based on this finding, we derived a risk signature, using seven m(6)A RNA methylation regulators, that is not only an independent prognostic marker but can also predict the clinicopathological features of gliomas. Moreover, m(6)A regulators are associated with the mesenchymal subtype and TMZ sensitivity in GBM. In conclusion, m(6)A RNA methylation regulators are crucial participants in the malignant progression of gliomas and are potentially useful for prognostic stratification and treatment strategy development.
引用
收藏
页码:1204 / 1225
页数:22
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