Mass spectrometry-based DNA adductomics

被引:4
|
作者
Cui, Yuxiang [1 ]
Wang, Yinsheng [1 ,2 ]
机构
[1] Environm Toxicol Grad Program, Riverside, CA 92521 USA
[2] Univ Calif Riverside, Dept Chem, Riverside, CA 92521 USA
基金
美国国家卫生研究院;
关键词
PERFORMANCE LIQUID-CHROMATOGRAPHY; TOBACCO-SMOKE CARCINOGENS; SIMULTANEOUS QUANTIFICATION; COMPREHENSIVE ANALYSIS; LIPID-PEROXIDATION; CROSS-LINKS; NUCLEASE P1; LC-MS/MS; IDENTIFICATION; DAMAGE;
D O I
10.1016/j.trac.2022.116773
中图分类号
O65 [分析化学];
学科分类号
070302 ; 081704 ;
摘要
DNA adducts can be induced by both endogenous and external sources. Qualitative and quantitative characterizations of DNA adducts are crucial to understanding their roles in the etiology of human diseases. With the advances in mass spectrometry instrumentation, DNA adductomics aims to characterizing comprehensively DNA adducts, i.e., to screen and discover new DNA adducts, and to quantify a large number of adducts of interest. Here, we summarize the current workflow in DNA adductomics, with emphasis being placed on sample preparation and mass spectrometric methods. We also highlight recent applications of these methods, where we discuss the use of DNA adductomics methods in screening/identifying DNA adducts of biological importance and human health relevance. Future work on automated data processing software and targeted applications for adductome profiling will further advance the DNA adductomics field. (c) 2022 Elsevier B.V. All rights reserved.
引用
收藏
页数:12
相关论文
共 50 条
  • [41] Mass spectrometry-based fecal metabolome analysis
    Xu, Jing
    Zhang, Qin-Feng
    Zheng, Jie
    Yuan, Bi-Feng
    Feng, Yu-Qi
    TRAC-TRENDS IN ANALYTICAL CHEMISTRY, 2019, 112 : 161 - 174
  • [42] Mass Spectrometry-Based Quantification of Pseudouridine in RNA
    Addepalli, Balasubrahmanyam
    Limbach, Patrick A.
    JOURNAL OF THE AMERICAN SOCIETY FOR MASS SPECTROMETRY, 2011, 22 (08) : 1363 - 1372
  • [43] Mass spectrometry-based lipid analysis and imaging
    Pathmasiri, Koralege C.
    Nguyen, Thu T. A.
    Khamidova, Nigina
    Cologna, Stephanie M.
    NEW METHODS AND SENSORS FOR MEMBRANE AND CELL VOLUME RESEARCH, 2021, 88 : 315 - 357
  • [44] Modern Mass Spectrometry-Based Structural Proteomics
    Petrotchenko, Evgeniy V.
    Borchers, Christoph H.
    PROTEOMICS IN BIOMEDICINE AND PHARMACOLOGY, 2014, 95 : 193 - 213
  • [45] Mass spectrometry-based proteomics in the life sciences
    C. S. Lane
    Cellular and Molecular Life Sciences CMLS, 2005, 62 : 848 - 869
  • [46] MASS SPECTROMETRY-BASED PERSONALIZED DRUG THERAPY
    Cui, Jia-Jia
    Wang, Lei-Yun
    Tan, Zhi-Rong
    Zhou, Hong-Hao
    Zhan, Xianquan
    Yin, Ji-Ye
    MASS SPECTROMETRY REVIEWS, 2020, 39 (5-6) : 523 - 552
  • [47] Mass Spectrometry-based Metabolomics in Translational Research
    Kim, Su Jung
    Song, Ha Eun
    Lee, Hyo Yeong
    Yoo, Hyun Ju
    ADVANCED IMAGING AND BIO TECHNIQUES FOR CONVERGENCE SCIENCE, 2021, 1310 : 509 - 531
  • [48] A stress test for mass spectrometry-based proteomics
    Aebersold, Ruedi
    NATURE METHODS, 2009, 6 (06) : 411 - 412
  • [49] Mass spectrometry-based metabolomics in microbiome investigations
    Anelize Bauermeister
    Helena Mannochio-Russo
    Letícia V. Costa-Lotufo
    Alan K. Jarmusch
    Pieter C. Dorrestein
    Nature Reviews Microbiology, 2022, 20 : 143 - 160
  • [50] Characterizing citrullination by mass spectrometry-based proteomics
    Rebak, A. S.
    Hendriks, I. A.
    Nielsen, M. L.
    PHILOSOPHICAL TRANSACTIONS OF THE ROYAL SOCIETY B-BIOLOGICAL SCIENCES, 2023, 378 (1890)