Enhancer-associated long non-coding RNA LEEN Eregulates endothelial nitric oxide synthase and endothelial function

被引:124
|
作者
Miao, Yifei [1 ]
Ajami, Nassim E. [2 ]
Huang, Tse-Shun [3 ,4 ]
Lin, Feng-Mao [1 ]
Lou, Chih-Hong [5 ]
Wang, Yun-Ting [1 ]
Li, Shuai [6 ]
Kang, Jian [6 ]
Munkacsi, Hannah [5 ]
Maurya, Mano R. [3 ,4 ]
Gupta, Shakti [3 ,4 ]
Chien, Shu [3 ,4 ,6 ]
Subramaniam, Shankar [3 ,4 ,7 ,8 ,9 ]
Chen, Zhen [1 ]
机构
[1] City Hope Natl Med Ctr, Beckman Res Inst, Dept Diabet Complicat & Metab, 1500 Duarte Rd, Duarte, CA 91010 USA
[2] Univ Calif San Diego, Bioinformat & Syst Biol Grad Program, 9500 Gilman Dr, La Jolla, CA 92093 USA
[3] Univ Calif San Diego, Dept Bioengn, 9500 Gilman Dr, La Jolla, CA 92093 USA
[4] Univ Calif San Diego, Inst Engn Med, 9500 Gilman Dr, La Jolla, CA 92093 USA
[5] City Hope Natl Med Ctr, Beckman Res Inst, Genome Editing Core, 1500 Duarte Rd, Duarte, CA 91010 USA
[6] Univ Calif San Diego, Dept Med, 9500 Gilman Dr, La Jolla, CA 92093 USA
[7] Univ Calif San Diego, Dept Cellular, 9500 Gilman Dr, La Jolla, CA 92093 USA
[8] Univ Calif San Diego, Dept Mol Med, 9500 Gilman Dr, La Jolla, CA 92093 USA
[9] Univ Calif San Diego, Dept Comp Sci & Engn, 9500 Gilman Dr, La Jolla, CA 92093 USA
来源
NATURE COMMUNICATIONS | 2018年 / 9卷
基金
美国国家卫生研究院;
关键词
CHROMATIN INTERACTIONS; DNA METHYLATION; GENE-EXPRESSION; DISTURBED FLOW; TRANSCRIPTION; CELLS; PRINCIPLES; MEDIATOR; PERSPECTIVES; ACTIVATION;
D O I
10.1038/s41467-017-02113-y
中图分类号
O [数理科学和化学]; P [天文学、地球科学]; Q [生物科学]; N [自然科学总论];
学科分类号
07 ; 0710 ; 09 ;
摘要
The optimal expression of endothelial nitric oxide synthase (eNOS), the hallmark of endothelial homeostasis, is vital to vascular function. Dynamically regulated by various stimuli, eNOS expression is modulated at transcriptional, post-transcriptional, and post-translational levels. However, epigenetic modulations of eNOS, particularly through long non-coding RNAs (lncRNAs) and chromatin remodeling, remain to be explored. Here we identify an enhancer-associated lncRNA that enhances eNOS expression (LEENE). Combining RNA-sequencing and chromatin conformation capture methods, we demonstrate that LEENE is co-regulated with eNOS and that its enhancer resides in proximity to eNOS promoter in endothelial cells (ECs). Gain-and Loss-of-function of LEENE differentially regulate eNOS expression and EC function. Mechanistically, LEENE facilitates the recruitment of RNA Pol II to the eNOS promoter to enhance eNOS nascent RNA transcription. Our findings unravel a new layer in eNOS regulation and provide novel insights into cardiovascular regulation involving endothelial function.
引用
收藏
页数:13
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