Spirosoma litoris sp nov., a bacterium isolated from beach soil

被引:5
|
作者
Okiria, Joseph [1 ]
Ten, Leonid N. [1 ]
Lee, Jae-Jin [1 ]
Lee, Seung-Yeol [1 ]
Cho, Young-Je [2 ]
Kim, Myung Kyum [3 ]
Jung, Hee-Young [1 ,4 ]
机构
[1] Kyungpook Natl Univ, Sch Appl Biosci, Daegu 41566, South Korea
[2] Kyungpook Natl Univ, Sch Food Sci & Biotechnol, Food & Bioind Res Inst, Daegu 41566, South Korea
[3] Seoul Womens Univ, Dept Bio & Environm Technol, Seoul 01797, South Korea
[4] Kyungpook Natl Univ, Inst Plant Med, Daegu 41566, South Korea
关键词
Spirosoma; Bacteroidetes; polyphasic taxonomy; EMENDED DESCRIPTION; SEQUENCE; GENE;
D O I
10.1099/ijsem.0.002394
中图分类号
Q93 [微生物学];
学科分类号
071005 ; 100705 ;
摘要
A Gram-stain-negative, non-motile, non-spore-forming, rod-shaped, aerobic bacterium, designated 15J16-2T3A(T), was isolated from beach soil on Jeju Island, South Korea. Strain 15J16-2T3A(T) grew at 10-37 degrees C (optimum growth at 25 degrees C) and pH 6.5-8.5 (optimum growth at pH 7). Based on 16S rRNA gene phylogenetic analysis, the novel strain was closely related to members of the genus Spirosoma (94.8-89.9% similarities) and formed a separate branch within the genus together with Spirosoma luteolum 16F6E(T) in neighbour-joining, maximum-likelihood and maximum-parsimony phylogenetic trees. The G+C content of the genomic DNA of strain 15J16-2T3A(T) was 47.6 mol%. The detection of menaquinone MK-7 as the predominant respiratory quinone, a fatty acid profile with summed feature 3 (C-16 : (1)omega 7c/C-16 : (1)omega 6c; 35.5 %), C-16 : (1)omega 5c (26.6 %), and iso C-15 : 0 (10.1 %) as the major components, phosphatidylethanolamine and unidentified aminophospholipid as the major polar lipids also support the affiliation of strain 15J16-2T3A(T) with the genus Spirosoma. The results of physiological and biochemical tests allowed genotypic and phenotypic differentiation of strain 15J16-2T3A(T) from members the genus Spirosoma. On the basis of its phenotypic properties and phylogenetic distinctiveness, strain 15J16-2T3A T represents a novel species of the genus Spirosoma, for which the name Spirosoma litoris sp. nov. is proposed. The type strain is 15J16-2T3A(T) (= KCTC 52029(T) = JCM 31999(T)).
引用
收藏
页码:4986 / 4991
页数:6
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