RNA splicing: a dual-edged sword for hepatocellular carcinoma

被引:9
|
作者
Kashyap, Anjali [1 ]
Tripathi, Greesham [2 ]
Tripathi, Avantika [2 ]
Rao, Rashmi [3 ]
Kashyap, Manju [4 ,5 ]
Bhat, Anjali [6 ]
Kumar, Deepak [7 ]
Rajhans, Anjali [2 ]
Kumar, Pravindra [3 ]
Chandrashekar, Darshan Shimoga [8 ]
Mahmood, Riaz [9 ]
Husain, Amjad [10 ,11 ]
Zayed, Hatem [12 ]
Bharti, Alok Chandra [6 ]
Kashyap, Manoj Kumar [2 ,6 ]
机构
[1] Thapar Inst Engn & Technol, Dept Biotechnol, Patiala, Punjab, India
[2] Amity Univ Haryana, Amity Med Sch, Amity Stem Cell Inst, Panchgaon 122413, Haryana, India
[3] Glocal Univ, Sch Life & Allied Hlth Sci, Saharanpur, UP, India
[4] Univ San Sebastian, Fac Ingn & Tecnol, Concepcion, Chile
[5] Natl Inst Immunol, Aruna Asaf Ali Marg, Delhi 110067, India
[6] Univ Delhi, Mol Oncol Lab, Dept Zool, North Campus, New Delhi 110007, India
[7] ThermoFisher Sci, Carlsbad, CA 92008 USA
[8] Univ Alabama Birmingham, Dept Pathol, Mol & Cellular Pathol, Birmingham, AL 35294 USA
[9] Kuvempu Univ, Dept Biotechnol & Bioinformat, Jnanasahyadri 577451, Karnataka, India
[10] Indian Inst Sci Educ & Res IISER, Ctr Sci & Soc, Bhopal, India
[11] Indian Inst Sci Educ & Res IISER, Innovat & Incubat Ctr Entrepreneurship IICE, Bhopal, India
[12] Qatar Univ, Coll Hlth & Sci, Dept Biomed Sci, QU Hlth, Doha, Qatar
关键词
Alternative RNA splicing; ARS; RNA processing; Spliceosome; Transcript variants; Hepatocellular carcinoma; Hepatoma; NAFLD; RNA splicing; NASH; Cirrhosis; Splicing factors; RNA-Seq; Intron retention; Exon skipping; INDICATES POOR-PROGNOSIS; CRYO-EM STRUCTURE; THERAPEUTIC TARGET; CELL-PROLIFERATION; LIVER-DISEASE; GENE-PRODUCT; CANCER-CELLS; COPY-NUMBER; SMN COMPLEX; BCL-X;
D O I
10.1007/s12032-022-01726-8
中图分类号
R73 [肿瘤学];
学科分类号
100214 ;
摘要
RNA splicing is the fundamental process that brings diversity at the transcriptome and proteome levels. The spliceosome complex regulates minor and major processes of RNA splicing. Aberrant regulation is often associated with different diseases, including diabetes, stroke, hypertension, and cancer. In the majority of cancers, dysregulated alternative RNA splicing (ARS) events directly affect tumor progression, invasiveness, and often lead to poor survival of the patients. Alike the rest of the gastrointestinal malignancies, in hepatocellular carcinoma (HCC), which alone contributes to similar to 75% of the liver cancers, a large number of ARS events have been observed, including intron retention, exon skipping, presence of alternative 3'-splice site (3'SS), and alternative 5'-splice site (5'SS). These events are reported in spliceosome and non-spliceosome complexes genes. Molecules such as MCL1, Bcl-X, and BCL2 in different isoforms can behave as anti-apoptotic or pro-apoptotic, making the spliceosome complex a dual-edged sword. The anti-apoptotic isoforms of such molecules bring in resistance to chemotherapy or cornerstone drugs. However, in contrast, multiple malignant tumors, including HCC that target the proapoptotic favoring isoforms/variants favor apoptotic induction and make chemotherapy effective. Herein, we discuss different splicing events, aberrations, and antisense oligonucleotides (ASOs) in modulating RNA splicing in HCC tumorigenesis with a possible therapeutic outcome.
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页数:31
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