Building and analysing an integrative model of HIV-1 RNA alternative splicing

被引:0
|
作者
Bockmayr, A
Courtois, A
Eveillard, D
Vezain, M
机构
[1] Univ Nancy, CNRS, INRIA, LORIA,UMR 7503, F-54506 Vandoeuvre Les Nancy, France
[2] CNRS, UHP, BP 239, UMR 7567,Lab Maturat ARN & Enzymol Mol, F-54506 Vandoeuvre Les Nancy, France
来源
关键词
D O I
暂无
中图分类号
Q5 [生物化学];
学科分类号
071010 ; 081704 ;
摘要
We present a multi-site model describing the alternative use of the RNA splicing sites A3, A4, A5 and A7 in the human immunodeficiency virus HIV-1. Our goal is to integrate experimental data obtained on individual splicing sites into a global model of HIV-1 RNA alternative splicing. We give a qualitative validation of our model, and analyse the possible impact of variations of regulatory protein concentrations on virus multiplication.
引用
收藏
页码:43 / 57
页数:15
相关论文
共 50 条
  • [41] Probing alternative foldings of the HIV-1 leader RNA by antisense oligonucleotide scanning arrays
    Ooms, M
    Verhoef, K
    Southern, E
    Huthoff, H
    Berkhout, B
    NUCLEIC ACIDS RESEARCH, 2004, 32 (02) : 819 - 827
  • [42] The PI3K pathway acting on alternative HIV-1 pre-mRNA splicing
    Hillebrand, Frank
    Erkelenz, Steffen
    Diehl, Nora
    Widera, Marek
    Noffke, Juliane
    Avota, Elita
    Schneider-Schaulies, Sibylle
    Dabauvalle, Marie-Christine
    Schaal, Heiner
    JOURNAL OF GENERAL VIROLOGY, 2014, 95 : 1809 - 1815
  • [43] RNA interference and HIV-1 infection
    Kanzaki, Luis Isamu Barros
    Ornelas, Socrates Souza
    Arganaraz, Enrique R.
    REVIEWS IN MEDICAL VIROLOGY, 2008, 18 (01) : 5 - 18
  • [44] Circularization of the HIV-1 RNA genome
    Ooms, Marcel
    Abbink, Truus E. M.
    Pham, Chi
    Berkhout, Ben
    NUCLEIC ACIDS RESEARCH, 2007, 35 (15) : 5253 - 5261
  • [45] Ultrastructure of HIV-1 genomic RNA
    Hoglund, S
    Ohagen, A
    Goncalves, J
    Panganiban, AT
    Gabuzda, D
    VIROLOGY, 1997, 233 (02) : 271 - 279
  • [46] RNA干扰和HIV-1
    陈彬
    杨磊
    谭晓华
    生命的化学, 2010, 30 (02) : 159 - 164
  • [47] ULTRASTRUCTURE OF HIV-1 GENOMIC RNA
    HOGLUND, S
    GONCALVES, J
    OHAGEN, A
    GABUZDA, D
    AIDS RESEARCH AND HUMAN RETROVIRUSES, 1995, 11 : S105 - S105
  • [48] HIV-1: Fifteen proteins and an RNA
    Frankel, AD
    Young, JAT
    ANNUAL REVIEW OF BIOCHEMISTRY, 1998, 67 : 1 - 25
  • [49] HIV-1 induces RNA silencing
    Flores, G
    SCIENTIST, 2005, 19 (11): : 28 - 28
  • [50] HIV-1 RNA and viral load
    Relucio, K
    Holodniy, M
    CLINICS IN LABORATORY MEDICINE, 2002, 22 (03) : 593 - +