机构:
Raman Res Inst, Bangalore 560080, Karnataka, IndiaRaman Res Inst, Bangalore 560080, Karnataka, India
Sinha, Supurna
[1
]
机构:
[1] Raman Res Inst, Bangalore 560080, Karnataka, India
来源:
PHYSICAL REVIEW E
|
2008年
/
77卷
/
06期
关键词:
D O I:
10.1103/PhysRevE.77.061903
中图分类号:
O35 [流体力学];
O53 [等离子体物理学];
学科分类号:
070204 ;
080103 ;
080704 ;
摘要:
We investigate the role of fluctuations in single-molecule measurements of torque-link (t-lk) curves. For semiflexible polymers of finite persistence length (i.e., polymers with contour length L comparable to the persistence length L-P), the torque versus link curve in the constant-torque (isotorque) ensemble is distinct from the one in the constant-link (isolink) ensemble. Thus, one encounters the conceptually interesting issue of a "free energy of transition" in switching ensembles while making torque-link measurements. We predict the dependence on the semiflexibility parameter beta=L/L-P of this extra contribution to the free energy, which shows up as an area in the torque-link plane. This can be tested against future torque-link experiments with single biopolymers. We bring out the inequivalence of torque-link curves for a stiff polymer and present explicit analytical expressions for the distinct torque-link relations in the two ensembles and the free-energy difference in switching ensembles in this context. The predictions of our work can be tested against single-molecule experiments on torsionally constrained biopolymers.