Transcription Factor AP1 Potentiates Chromatin Accessibility and Glucocorticoid Receptor Binding

被引:347
|
作者
Biddie, Simon C. [1 ,4 ]
John, Sam [1 ]
Sabo, Pete J. [3 ]
Thurman, Robert E. [3 ]
Johnson, Thomas A. [1 ]
Schiltz, R. Louis [1 ]
Miranda, Tina B. [1 ]
Sung, Myong-Hee [1 ]
Trump, Saskia [5 ]
Lightman, Stafford L. [4 ]
Vinson, Charles [2 ]
Stamatoyannopoulos, John A. [3 ]
Hager, Gordon L. [1 ]
机构
[1] NCI, Lab Receptor Biol & Gene Express, NIH, Bethesda, MD 20892 USA
[2] NCI, Lab Metab, NIH, Bethesda, MD 20892 USA
[3] Univ Washington, Dept Genome Sci, Seattle, WA 98195 USA
[4] Univ Bristol, Henry Wellcome Labs Neurosci & Endocrinol, Fac Med & Dent, Bristol BS1 3NY, Avon, England
[5] UFZ Helmholtz Ctr Environm Res, Dept Environm Immunol, D-04318 Leipzig, Germany
基金
美国国家卫生研究院;
关键词
NF-KAPPA-B; DNA-BINDING; IN-VIVO; RETINOIC ACID; C-JUN; PROTEIN; ACTIVATION; GENE; REPRESSION; SEQUENCE;
D O I
10.1016/j.molcel.2011.06.016
中图分类号
Q5 [生物化学]; Q7 [分子生物学];
学科分类号
071010 ; 081704 ;
摘要
Ligand-dependent transcription by the nuclear receptor glucocorticoid receptor (GR) is mediated by interactions with coregulators. The role of these interactions in determining selective binding of GR to regulatory elements remains unclear. Recent findings indicate that a large fraction of genomic GR binding coincides with chromatin that is accessible prior to hormone treatment, suggesting that receptor binding is dictated by proteins that maintain chromatin in an open state. Combining DNasel accessibility and chromatin immunoprecipitation with high-throughput sequencing, we identify the activator protein 1 (AP1) as a major partner for productive GR-chromatin interactions. AP1 is critical for GR-regulated transcription and recruitment to co-occupied regulatory elements, illustrating an extensive AP1-GR interaction network. Importantly, the maintenance of baseline chromatin accessibility facilitates GR recruitment and is dependent on AP1 binding. We propose a model in which the basal occupancy of transcription factors acts to prime chromatin and direct inducible transcription factors to select regions in the genome.
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页码:145 / 155
页数:11
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