Analysis of 12 X-chromosomal markers in the population of central Croatia

被引:6
|
作者
Crnjac, Josip [1 ]
Ozretic, Petar [2 ]
Merkas, Sinisa [3 ,4 ]
Ratko, Martina [3 ]
Lozancic, Mateja [3 ]
Rozic, Sara [3 ,4 ]
Spoljaric, Daniel [5 ]
Korolija, Marina [3 ,4 ]
Popovic, Maja [5 ]
Mrsic, Gordan [3 ,4 ]
机构
[1] Univ Split, Univ Dept Forens Sci, Split, Croatia
[2] Rudjer Boskovic Inst, Zagreb, Croatia
[3] Forens Sci Ctr Ivan Vucetic, Zagreb, Croatia
[4] Univ Zagreb, Forens Sci Off, Zagreb, Croatia
[5] Univ Zagreb, Fac Vet Med, Zagreb, Croatia
关键词
X-STR; Investigato (R) Argus X-12; Population study; Forensics; Central Croatia; GENETIC-ANALYSIS; STRS;
D O I
10.1016/j.legalmed.2016.07.001
中图分类号
DF [法律]; D9 [法律]; R [医药、卫生];
学科分类号
0301 ; 10 ;
摘要
Investigato (R) Argus X-12 Kit is a commercially available set that allows simultaneous PCR amplification of 12 X-STR markers belonging to four linkage groups (LG). To assess the forensic efficiency of these markers for the population of central Croatia and consequent applicability in routine forensic casework, DNA from 200 blood samples of unrelated donors (100 female and 100 male) was amplified by Investigato (R) Argus X-12 Kit and analyzed by capillary electrophoresis. Statistical computations based on allele and haplotype frequencies for LG1 - LG4 were performed using Arlequin 3.5 software and on-line tool available at ChrX-STR.org. In female samples, all X-STR markers were in Hardy-Weinberg equilibrium (HWE). The most informative marker for central Croatia population was DXS10135 with polymorphism information content (PIC) 0.9296. The least polymorphic locus was DXS8378 (PIC = 0.6363). Power of discrimination (PD) varied from 0.6968 to 0.9336 in male and from 0.8476 to 0.9916 in female samples. Combined PD exceeded 0.999999999 in both men and women. In male samples, linkage disequilibrium (LD) test revealed significant association (P = 0.0000) of one marker pair in LG4 and two marker pairs in LG3. Portion of observed haplotypes in the number of possible haplotypes varied from 2.86% to 7.47% across all LGs. LG1 was the most informative with haplotype diversity (H) 0.9972. High PD of all analyzed markers exhibited for central Croatia population confirms suitability of Investigato (R) Argus X-12 for forensic pertinence. Moreover, results of this study will be included in establishing a national reference X-STR database based on 12 X-STR loci, which is necessary for the correct interpretation of the forensic casework results. (C) 2016 Elsevier Ireland Ltd. All rights reserved.
引用
收藏
页码:77 / 84
页数:8
相关论文
共 50 条
  • [11] Genetic diversity of 12 X-chromosomal short tandem repeats in the Moroccan population
    Bentayebi, Kaoutar
    Picornell, Antonia
    Bouabdeallah, Mehdi
    Castro, Jose Aurelio
    Aboukhalid, Rachid
    Squalli, Driss
    Misericordia, Maria
    Amzazi, Saaid
    FORENSIC SCIENCE INTERNATIONAL-GENETICS, 2012, 6 (01) : E48 - E49
  • [12] Population data of eight X-chromosomal STR markers in Ewe individuals from Ghana
    Thiele, Karlheinz
    Loeffler, Steffi
    Loeffler, Juergen
    Guenthner, Franziska
    Nitschke, Katja
    Edelmann, Jeanett
    Lessig, Ruediger
    FORENSIC SCIENCE INTERNATIONAL GENETICS SUPPLEMENT SERIES, 2008, 1 (01) : 167 - 169
  • [13] Kinship testing with X-chromosomal markers: Mathematical and statistical issues
    Krawczak, Michael
    FORENSIC SCIENCE INTERNATIONAL-GENETICS, 2007, 1 (02) : 111 - 114
  • [14] Polymorphism of eight X-chromosomal STRs in a Japanese population
    Hashiyada, Masaki
    Itakura, Yukio
    Funayama, Masato
    FORENSIC SCIENCE INTERNATIONAL GENETICS SUPPLEMENT SERIES, 2008, 1 (01) : 150 - 152
  • [15] Population genetic comparisons of three X-chromosomal STRs
    P. Wiegand
    B. Berger
    J. Edelmann
    W. Parson
    International Journal of Legal Medicine, 2003, 117 : 62 - 65
  • [16] Population genetic comparisons of three X-chromosomal STRs
    Wiegand, P
    Berger, B
    Edelmann, J
    Parson, W
    INTERNATIONAL JOURNAL OF LEGAL MEDICINE, 2003, 117 (01) : 62 - 65
  • [17] Population data of 10 X-chromosomal loci in Latvia
    Poetsch, M
    Sabule, A
    Petersmann, H
    Volksone, V
    Lignitz, E
    FORENSIC SCIENCE INTERNATIONAL, 2006, 157 (2-3) : 206 - 209
  • [18] MOLECULAR ANALYSIS OF X-CHROMOSOMAL STRUCTURAL ABNORMALITIES
    ABOALHASAN, SJ
    BOYD, E
    CONNOR, JM
    JOURNAL OF MEDICAL GENETICS, 1988, 25 (04) : 278 - 278
  • [19] X-chromosomal STRs in aDNA kinship analysis
    Bretschneider, Anna
    Mazanec, Janine
    Wittmeier, Patrick
    Flux, Anna Lena
    Schmidt, Diane
    Hummel, Susanne
    ANTHROPOLOGISCHER ANZEIGER, 2024, 81 (02) : 131 - 138
  • [20] Development of two multiplex PCR systems for the analysis of 12 X-chromosomal STR loci in a northwestern Italian population sample
    Robino, C.
    Giolitti, A.
    Gino, S.
    Torre, C.
    INTERNATIONAL JOURNAL OF LEGAL MEDICINE, 2006, 120 (05) : 315 - 318