Molecular dynamics simulation of the cooperative effect by different force fields in monosodium glutamate aqueous solution

被引:6
|
作者
Liu, Fenghai [1 ]
Wang, Feng [2 ]
Jia, Guozhu [2 ]
Huang, Kama [1 ]
机构
[1] Sichuan Univ, Coll Elect & Informat Engn, Chengdu 610064, Peoples R China
[2] Sichuan Normal Univ, Coll Phys & Elect Engn, Chengdu, Peoples R China
来源
RSC ADVANCES | 2015年 / 5卷 / 45期
基金
中国国家自然科学基金;
关键词
GLOBAL GEOMETRY OPTIMIZATION; WATER PENTAMER STRUCTURE; DIELECTRIC-PROPERTIES; COMPUTER-SIMULATION; CLUSTERS (H2O)(N); AB-INITIO; SPECTROSCOPY; SPECTRA; TEMPERATURE; RELAXATION;
D O I
10.1039/c4ra11328d
中图分类号
O6 [化学];
学科分类号
0703 ;
摘要
Different force fields (GROMOS and OPLS) in conjunction with different water models (SPC, SPCE, TIP3P, TIP4P and TIP5P) were assessed using molecular dynamics simulations of monosodium glutamate (MSG) aqueous solution. The dielectric constant obtained using GROMOS with TIP3P matches with the experimental results from dielectric spectroscopy (DRS) with minimum error. The structural information of MSG aqueous solution was also investigated. It was found that the hydration shells of water around charged particles (Na+ and Glu(-)) highly influence the dielectric constant of the solution. In addition to the first hydration shell, the second shell also affects the dielectric constant. Glu(-) weakened the hydrogen bond (HB) lifetime between water molecules in MSG aqueous solution compared to the water-water HB lifetime in pure water. It seems that a 10 ns simulation is not long enough to accurately determine the dielectric constant using the GROMOS force field with the TIP3P model of water.
引用
收藏
页码:35572 / 35578
页数:7
相关论文
共 50 条
  • [41] Molecular dynamics simulation of temperature-dependent atrazine aqueous solution
    Yang, Xin
    Cheng, Ke
    Jia, Guo-zhu
    JOURNAL OF MOLECULAR LIQUIDS, 2018, 256 : 456 - 461
  • [42] Molecular Dynamics Simulation on Nucleation of Ammonium Perchlorate from an Aqueous Solution
    Shim, Hong-Min
    Kim, Jae-Kyeong
    Kim, Hyoun-Soo
    Koo, Kee-Kahb
    CRYSTAL GROWTH & DESIGN, 2014, 14 (11) : 5897 - 5903
  • [43] Molecular dynamics simulation of electrokinetic flow of an aqueous electrolyte solution in nanochannels
    Yoshida, Hiroaki
    Mizuno, Hideyuki
    Kinjo, Tomoyuki
    Washizu, Hitoshi
    Barrat, Jean-Louis
    JOURNAL OF CHEMICAL PHYSICS, 2014, 140 (21):
  • [44] MOLECULAR-DYNAMICS SIMULATION OF AN AQUEOUS NACLO4 SOLUTION
    HEINJE, G
    LUCK, WAP
    HEINZINGER, K
    JOURNAL OF PHYSICAL CHEMISTRY, 1987, 91 (02): : 331 - 338
  • [45] Molecular dynamics simulation of epidermal growth factors in aqueous solution.
    Watts, CR
    Lovas, S
    Murphy, RF
    PEPTIDES: FRONTIERS OF PEPTIDES SCIENCE, 1999, : 412 - 413
  • [46] MOLECULAR-DYNAMICS SIMULATION OF A DILUTE AQUEOUS-SOLUTION OF BENZENE
    LINSE, P
    JOURNAL OF THE AMERICAN CHEMICAL SOCIETY, 1990, 112 (05) : 1744 - 1750
  • [47] Molecular dynamics simulation of the calmodulin-trifluoperazine complex in aqueous solution
    Yamaotsu, N
    Suga, M
    Hirono, S
    BIOPOLYMERS, 2001, 58 (04) : 410 - 421
  • [48] Coarse-Grained Molecular Dynamics Simulation of Surfactants in Aqueous Solution
    Chen Jingfei
    Hao Jingcheng
    PROGRESS IN CHEMISTRY, 2012, 24 (10) : 1890 - 1896
  • [49] Molecular dynamics simulation of liquid ethylene glycol and its aqueous solution
    de Oliveira, OV
    Freitas, LCG
    JOURNAL OF MOLECULAR STRUCTURE-THEOCHEM, 2005, 728 (1-3): : 179 - 187
  • [50] Molecular Dynamics Simulation of Aqueous Urea Solution: Is Urea a Structure Breaker?
    Bandyopadhyay, Dibyendu
    Mohan, Sadhana
    Ghosh, Swapan K.
    Choudhury, Niharendu
    JOURNAL OF PHYSICAL CHEMISTRY B, 2014, 118 (40): : 11757 - 11768