Description of five novel thermophilic species of the genus Thermus: Thermus hydrothermalis sp. nov., Thermus neutrinimicus sp. nov., Thermus thalpophilus sp. nov., Thermus albus sp. nov., and Thermus altitudinis sp. nov., isolated from hot spring sediments

被引:3
|
作者
Li, Meng-Meng [1 ,2 ]
Lv, Ai-Ping [1 ,2 ]
Zhao, Zi-Yu [3 ]
Xian, Wen-Dong [4 ]
Lian, Zheng-Han [1 ,2 ]
OuYang, Yu-Ting [1 ,2 ]
Ming, Hong [3 ]
Tan, Sha [1 ,2 ]
Jiao, Jian-Yu [1 ,2 ]
Zhou, En-Min [5 ]
Liu, Lan [1 ,2 ]
Li, Wen-Jun [1 ,2 ,6 ]
机构
[1] Sun Yat Sen Univ, Sch Life Sci, State Key Lab Biocontrol, Guangdong Prov Key Lab Plant Resources, Guangzhou 510275, Peoples R China
[2] Sun Yat Sen Univ, Sch ofLife Sci, Southern Marine Sci & Engn Guangdong Lab Zhuhai, Guangzhou 510275, Peoples R China
[3] Xinxiang Med Univ, Coll Life Sci & Technol, Synthet Biol Engn Lab Henan Prov, Xinxiang 453003, Peoples R China
[4] Zhejiang Ocean Univ, Marine Sci & Technol Coll, Zhoushan 316000, Peoples R China
[5] Yunnan Univ, Int Joint Res Ctr Karstol, Sch Earth Sci, Kunming 650091, Peoples R China
[6] Chinese Acad Sci, Xinjiang Inst Ecol & Geog, State Key Lab Desert & Oasis Ecol, Urumqi 830011, Peoples R China
关键词
Thermus; Five novel species; Tibet hot spring; Denitrification; BACTERIUM; YUNNAN; TREE; CLASSIFICATION; ALGORITHM; SEQUENCES; QUALITY; RATES; TOOL;
D O I
10.1016/j.syapm.2022.126361
中图分类号
Q81 [生物工程学(生物技术)]; Q93 [微生物学];
学科分类号
071005 ; 0836 ; 090102 ; 100705 ;
摘要
Biological denitrification is a significant process in nitrogen biogeochemical cycle of terrestrial geother-mal environments, and Thermus species have been shown to be crucial heterotrophic denitrifier in hydrothermal system. Five Gram-stain negative, aerobic and rod-shaped thermophilic bacterial strains were isolated from hot spring sediments in Tibet, China. Phylogenetic analysis based on 16S rRNA gene and whole genome sequences indicated that these isolates should be assigned to the genus Thermus and were most closely related to Thermus caldifontis YIM 73026T, and Thermus brockianus YS38T. Average nucleotide identity (ANI) and digital DNA-DNA hybridization (dDDH) values between the five strains and the type strains of the genus Thermus were lower than the threshold values (95% and 70%, respec-tively) recommended for bacterial species, which clearly distinguished the five isolates from other spe -cies of the genus Thermus and indicated that they represent independent species. Colonies are circular, convex, non-transparent. Cell growth occurred at 37-80 degrees C (optimum, 60-65 degrees C), pH 6.0-8.0 (optimum, pH 7.0) and with 0-2.0% (w/v) NaCl (optimum, 0-0.5%). Denitrification genes (narG, nirK, nirS, and norB genes) detected in their genomes indicated their potential function in nitrogen metabolism. The obtained results combined with those of morphological, physiological, and chemotaxonomic characteristics, including the menaquinones, polar lipids, and cellular fatty acids showed that the isolates are proposed as representing five novel species of the genus Thermus, which are proposed as Thermus hydrothermalis sp. nov. SYSU G00291T, Thermus neutrinimicus sp. nov. SYSU G00388T, Thermus thalpophilus sp. nov. SYSU G00506T, Thermus albus sp. nov. SYSU G00608T, Thermus altitudinis sp. nov. SYSU G00630T.(c) 2022 Elsevier GmbH. All rights reserved.
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页数:10
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