Database Resources of the National Genomics Data Center in 2020

被引：167

作者：

Zhang, Zhang ^{[1
,2
,3
,10
,11
]}

Zhao, Wenming ^{[1
,2
,3
,10
]}

Xiao, Jingfa ^{[1
,2
,3
,10
]}

Bao, Yiming ^{[1
,2
,3
,10
,11
]}

He, Shunmin ^{[1
,4
,10
]}

Zhang, Guoqing ^{[1
,5
]}

Li, Yixue ^{[1
,5
]}

Zhao, Guoping ^{[1
,5
,6
,7
]}

Chen, Runsheng ^{[1
,4
,10
]}

Gao, Yang ^{[5
]}

Zhang, Chao ^{[5
]}

Yuan, Liyun ^{[5
]}

Xu, Shuhua ^{[5
,14
,15
,16
]}

Ning, Zhilin ^{[5
]}

Lu, Yan ^{[5
]}

Zeng, Jingyao ^{[1
,2
,3
]}

Yuan, Na ^{[1
,2
]}

Zhu, Junwei ^{[1
,2
]}

Pan, Mengyu ^{[1
,2
]}

Zhang, Hao ^{[1
,2
,3
,10
]}

Wang, Qi ^{[1
,2
,3
,10
]}

Shi, Shuo ^{[1
,2
,3
,10
]}

Jiang, Meiye ^{[1
,2
,3
,10
]}

Lu, Mingming ^{[1
,2
,3
,10
]}

Qian, Qiheng ^{[1
,2
,3
,10
]}

Gao, Qianwen ^{[1
,2
,3
,10
]}

Shang, Yunfei ^{[1
,2
,3
,10
]}

Wang, Jinyue ^{[1
,2
,3
,10
]}

Du, Zhenglin ^{[1
,2
]}

Tian, Dongmei ^{[1
,2
]}

Wang, Pei ^{[1
,2
,3
,10
]}

Tang, Bixia ^{[1
,2
]}

Li, Cuiping ^{[1
,2
]}

Teng, Xufei ^{[1
,2
,3
,10
]}

Liu, Xiaonan ^{[1
,2
,3
,10
]}

Zou, Dong ^{[1
,2
,3
]}

Song, Shuhui ^{[1
,2
,3
]}

Xiong, Zhuang ^{[1
,2
,3
,10
]}

Li, Mengwei ^{[1
,2
,3
,10
]}

Yang, Fei ^{[1
,2
,3
,10
]}

Ma, Yingke ^{[1
,2
,3
]}

Sang, Jian ^{[1
,2
,3
,10
]}

Li, Zhaohua ^{[1
,2
,3
,10
,11
]}

Li, Rujiao ^{[1
,2
,3
]}

Wang, Zhonghuang ^{[1
,2
,10
]}

Zhu, Qianghui ^{[9
,10
]}

Li, Xin ^{[9
]}

Zhang, Sisi ^{[1
,2
]}

Kang, Hailong ^{[1
,2
,10
]}

Dong, Lili ^{[1
,2
]}

机构：

[1] Natl Genom Data Ctr, Beijing 100101, Peoples R China

[2] Chinese Acad Sci, BIG Data Ctr, Beijing Inst Genom, Beijing 100101, Peoples R China

[3] Chinese Acad Sci, Beijing Inst Genom, CAS Key Lab Genome Sci & Informat, Beijing 100101, Peoples R China

[4] Chinese Acad Sci, Ctr Big Data Res Hlth, Inst Biophys, Key Lab RNA Biol, Beijing 100101, Peoples R China

[5] Chinese Acad Sci, Biomed Big Data Ctr, CAS MPG Partner Inst Computat Biol, Shanghai Inst Nutr & Hlth,Key Lab Computat Biol, Shanghai 200231, Peoples R China

[6] Chinese Acad Sci, Inst Plant Physiol & Ecol, Shanghai Inst Biol Sci, CAS Key Lab Synthet Biol, Shanghai 200231, Peoples R China

[7] Chinese Acad Sci, Ctr Quantitat Synthet Biol, Inst Synthet Biol, Shenzhen Inst Adv Technol, Shenzhen, Peoples R China

[8] Chinese Acad Sci, Adv Comp Res Ctr, Inst Comp Technol, Key Lab Intelligent Informat Proc, Beijing 100190, Peoples R China

[9] Chinese Acad Sci, Inst Zool, CAS Key Lab Anim Ecol & Conservat Biol, Beijing 100101, Peoples R China

[10] Univ Chinese Acad Sci, Beijing 100049, Peoples R China

[11] Univ Chinese Acad Sci, Sch Future Technol, Beijing 100049, Peoples R China

[12] Yunnan Univ, Sch Life Sci, Yunnan Inst Microbiol, Kunming 650091, Yunnan, Peoples R China

[13] Newcastle Univ, Sch Nat & Environm Sci, Ridley Bldg 2, Newcastle Upon Tyne, Tyne & Wear, England

[14] ShanghaiTech Univ, Sch Life Sci & Technol, Shanghai 201210, Peoples R China

[15] Chinese Acad Sci, Ctr Excellence Anim Evolut & Genet, Kunming 650223, Yunnan, Peoples R China

[16] Collaborat Innovat Ctr Genet & Dev, Shanghai 200438, Peoples R China

[17] China Agr Univ, Coll Agron & Biotechnol, Dept Crop Genom & Bioinformat, Beijing 100094, Peoples R China

[18] Beijing Forestry Univ, Beijing Adv Innovat Ctr Tree Breeding Mol Design, Beijing 100083, Peoples R China

[19] Peking Univ, Coll Life Sci, Beijing 100871, Peoples R China

[20] Beijing Forestry Univ, Coll Biol Sci & Biotechnol, Natl Engn Lab Tree Breeding, Beijing 100083, Peoples R China

[21] Southern Univ Sci & Technol SUSTech, Inst Plant & Food Sci, Dept Biol, Shenzhen 518055, Guangdong, Peoples R China

[22] Guangdong Acad Agr Sci, Rice Res Inst, Guangzhou 510640, Peoples R China

[23] Chinese Acad Sci, Inst Zool, Beijing 100101, Peoples R China

[24] Hunan Agr Univ, Coll Plant Protect, Changsha 410128, Hunan, Peoples R China

[25] Quaid I Azam Univ, Fac Biol Sci, Natl Ctr Bioinformat, Programme Comparat & Evolutionary Genom, Islamabad 45320, Pakistan

[26] Chinese Acad Sci, Beijing Inst Genom, Beijing 100101, Peoples R China

[27] Huazhong Univ Sci & Technol, Coll Life Sci & Technol, Dept Bioinformat & Syst Biol, Key Lab Mol Biophys,Minist Educ,Hubei Bioinformat, Wuhan 430074, Hubei, Peoples R China

[28] Harbin Med Univ, Coll Bioinformat Sci & Technol, Harbin 150081, Heilongjiang, Peoples R China

[29] Chinese Acad Sci, Beijing Inst Life Sci, Beijing 100101, Peoples R China

[30] Tianjin Univ, Sch Sci, Dept Phys, Tianjin 300072, Peoples R China

[31] Tianjin Univ, Frontier Sci Ctr Synthet Biol, Key Lab Syst Bioengn, Tianjin 300072, Peoples R China

[32] Collaborat Innovat Ctr Chem Sci & Engn Tianjin, SynBio Res Platform, Tianjin 300072, Peoples R China

[33] Chinese Acad Sci, Inst Zool, Key Lab Zool Systemat & Evolut, Beijing 100101, Peoples R China

[34] Chinese Acad Sci, Inst Zool, State Key Lab Integrated Management Pest Insects, Beijing 100101, Peoples R China

[35] Chinese Acad Sci, CAS Ctr Excellence Anim Evolut & Genet, Kunming 650223, Yunnan, Peoples R China

[36] Peking Univ, Ctr Noncoding RNA Med, Sch Basic Med Sci, Dept Biomed Informat,MOE Key Lab Cardiovasc Sci, Beijing 100190, Peoples R China

[37] Univ Elect Sci & Technol China, Ctr Bioinformat, Sch Life Sci & Technol, Key Lab Neuro Informat,Minist Educ, Chengdu 610054, Sichuan, Peoples R China

[38] Zhejiang Univ, Coll Life Sci, Inst Plant Sci, Dept Bioinformat,State Key Lab Plant Physiol & Bi, Hangzhou 310058, Zhejiang, Peoples R China

[39] Peking Univ, Biomed Pioneering Innovat Ctr BIOPIC, Beijing Adv Innovat Ctr Genom ICG, Ctr Bioinformat CBI, Beijing 100871, Peoples R China

[40] Peking Univ, Sch Life Sci, State Key Lab Prot & Plant Gene Res, Beijing 100871, Peoples R China

[41] Peking Univ, Inst Mol Med, Beijing 100871, Peoples R China

来源：

NUCLEIC ACIDS RESEARCH | 2020年 / 48卷 / D1期

基金：

中国国家自然科学基金;

关键词：

TOOLS;

D O I：

10.1093/nar/gkz913

中图分类号：

Q5 [生物化学]; Q7 [分子生物学];

学科分类号：

071010 ; 081704 ;

摘要：

The National Genomics Data Center (NGDC) provides a suite of database resources to support worldwide research activities in both academia and industry. With the rapid advancements in higher-throughput and lower-cost sequencing technologies and accordingly the huge volume of multi-omics data generated at exponential scales and rates, NGDC is continually expanding, updating and enriching its core database resources through big data integration and value-added curation. In the past year, efforts for update have been mainly devoted to BioProject, BioSample, GSA, GWH, GVM, NONCODE, LncBook, EWAS Atlas and IC4R. Newly released resources include three human genome databases (PGG. SNV, PGG. Han and CGVD), eLMSG, EWAS Data Hub, GWAS Atlas, iSheep and PADS Arsenal. In addition, four web services, namely, eGPS Cloud, BIG Search, BIG Submission and BIG SSO, have been significantly improved and enhanced.

引用

页码：D24 / D33

页数：10

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