Pseudomonas yamanorum sp nov., a psychrotolerant bacterium isolated from a subantarctic environment

被引:26
|
作者
Gonzalo Arnau, Victor [1 ]
Arturo Sanchez, Leandro [1 ]
Daniel Delgado, Osvaldo [2 ]
机构
[1] Consejo Nacl Invest Cient & Tecn, PROIMI, RA-4000 San Miguel De Tucuman, Argentina
[2] Univ Nacl Catamarca, CONICET, Ctr Invest & Transferencia Catamarca CITCa, San Fernando Valle Catam, Catamarca, Argentina
关键词
AD-HOC-COMMITTEE; DEOXYRIBONUCLEIC-ACID; MOLECULAR PHYLOGENY; NUMERICAL TAXONOMY; DNA HYBRIDIZATION; LIPID-COMPOSITION; SEQUENCE;
D O I
10.1099/ijs.0.065201-0
中图分类号
Q93 [微生物学];
学科分类号
071005 ; 100705 ;
摘要
A psychrotolerant strain, 8H1(T), was isolated from soil samples collected in Isla de los Estados, Ushuaia, Argentina. Cells were Gram-negative, aerobic, straight rods, occurring singly or in pairs, non-spore-forming and motile by means of two polar flagella. The isolate was able to grow in the range 4-35 degrees C, with optimum growth at 28 degrees C. The predominant cellular fatty acids were summed feature 3 (C-16:1 omega 6c and/or C-16:1 omega 7c), C-16:0 and summed feature 8 (C-18:1 omega 6c and/or G(18:1)omega 7a). The polar lipid pattern of strain 8H1(T) comprised phosphatidylglycerol, diphosphatidylglycerol, phosphatidylethanolamine and an unknown phospholipid. Ubiquinone 9 (Q-9) was the predominant lipoquinone. The DNA G+C content was 59.8 mol%. 16S rRNA gene sequence-based phylogeny suggested the affiliation of strain 8H1(T) to the 'Pseudomonas fluorescens group', displaying >= 98.5% sequence similarity to 29 type strains. A multilocus sequence analysis (MLSA) study performed by concatenating 16S rRNA, gyrB, rpoD and rpoB gene sequences showed that isolate 8H1(T) could be discriminated from closely related species of the genus Pseudomonas and placed in the 'Pseudomonas gessardii subgroup', including the species with the highest MLSA sequence similarities: Pseudomonas brenneri (96.2%), P. gessardii (96.1 %), P. proteolytica (90.0%), P. meridiana (96.0%) and P. mucidolens (95.4 %). DNA-DNA hybridization analysis between 8H1(T) and the type strains of these closely related species revealed relatedness values of 27.0, 8.8, 41.2, 39.7 and 46.1%, respectively. These results, together with differences in several phenotypic features, support the classification of a novel species, for which the name Pseudomonas yamanorum sp. nov. is proposed. The type strain is 8H1(T) (=DSM 26522(T)=CCUG 63249(T)=LMG 27247(T)).
引用
收藏
页码:424 / 431
页数:8
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