Automating deconvolution of heterogeneous bulk tumor genomic data

被引:0
|
作者
Roman, Theodore
Xiao, Brenda
Schwartz, Russell
机构
关键词
D O I
10.1158/1538-7445.AM2017-974
中图分类号
R73 [肿瘤学];
学科分类号
100214 ;
摘要
974
引用
收藏
页数:1
相关论文
共 50 条
  • [1] Improved geometric deconvolution of bulk tumor genomic data
    Roman, Theodore
    Xie, Lu
    Schwartz, Russell
    CANCER RESEARCH, 2016, 76
  • [2] Improved deconvolution of heterogeneous tumor data to reconstruct clonal evolution from bulk genomic samples
    Roman, Theodore
    Schwartz, Russell
    CANCER RESEARCH, 2015, 75
  • [3] Automated deconvolution of structured mixtures from heterogeneous tumor genomic data
    Roman, Theodore
    Xie, Lu
    Schwartz, Russell
    PLOS COMPUTATIONAL BIOLOGY, 2017, 13 (10)
  • [4] INTEGRATING TUMOR MICROENVIRONMENT WITH GENOMIC ABERRATIONS AND TUMOR CLASS IN ADULT GLIAL/GLIONEURONAL TUMORS BY DECONVOLUTION OF BULK METHYLATION DATA
    Singh, Omkar
    Aldape, Kenneth
    Pratt, Drew
    NEURO-ONCOLOGY, 2021, 23 : 118 - 118
  • [5] Medoidshift clustering applied to genomic bulk tumor data
    Theodore Roman
    Lu Xie
    Russell Schwartz
    BMC Genomics, 17
  • [6] Medoidshift clustering applied to genomic bulk tumor data
    Roman, Theodore
    Xie, Lu
    Schwartz, Russell
    BMC GENOMICS, 2016, 17
  • [7] DeMixMir: deconvolution of microRNA sequencing data from heterogeneous tumor samples
    Montierth, Matthew
    Nemeth, Kinga
    Tao, Xinghua
    Calin, George
    Wang, Wenyi
    CANCER RESEARCH, 2023, 83 (07)
  • [8] Deconvolution of copy number alterations combining bulk and single-cell genomic data
    Lei, Haoyun
    Lyu, Bochuan
    Gertz, E. Michael
    Schaeffer, Alejandro A.
    Shi, Xulian
    Wu, Kui
    Li, Guibo
    Xu, Liqin
    Hou, Yong
    Dean, Michael
    Schwartz, Russell
    CANCER RESEARCH, 2019, 79 (13)
  • [9] Tumor Copy Number Data Deconvolution Integrating Bulk and Single-cell Sequencing Data
    Lei, Haoyun
    Lyu, Bochuan
    Gertz, E. Michael
    Schaffer, Alejandro A.
    Schwartz, Russell
    2018 IEEE 8TH INTERNATIONAL CONFERENCE ON COMPUTATIONAL ADVANCES IN BIO AND MEDICAL SCIENCES (ICCABS), 2018,
  • [10] Tumor Copy Number Deconvolution Integrating Bulk and Single-Cell Sequencing Data
    Lei, Haoyun
    Lyu, Bochuan
    Gertz, E. Michael
    Schaffer, Alejandro A.
    Shi, Xulian
    Wu, Kui
    Li, Guibo
    Xu, Liqin
    Hou, Yong
    Dean, Michael
    Schwartz, Russell
    JOURNAL OF COMPUTATIONAL BIOLOGY, 2020, 27 (04) : 565 - 598