Machine Learning Approach to Predicting Stem Cell Donor Availability

被引:5
|
作者
Sivasankaran, Adarsh [1 ,2 ]
Williams, Eric [2 ]
Albrecht, Mark [2 ]
Switzer, Galen E. [3 ,4 ,5 ,6 ]
Cherkassky, Vladimir [1 ,7 ]
Maiers, Martin [2 ]
机构
[1] Univ Minnesota, Bioinformat & Computat Biol, Minneapolis, MN USA
[2] Ctr Int Blood & Marrow Transplant Res, Minneapolis, MN USA
[3] Univ Pittsburgh, Dept Med Psychiat & Clin & Translat Sci, Pittsburgh, PA USA
[4] Univ Pittsburgh, Dept Psychiat, Pittsburgh, PA USA
[5] Univ Pittsburgh, Dept Clin & Translat Sci, Pittsburgh, PA USA
[6] Vet Affairs Pittsburgh Healthcare Syst, Ctr Hlth Equ Res & Promot, Pittsburgh, PA USA
[7] Univ Minnesota, Dept Elect & Comp Engn, Minneapolis, MN USA
关键词
Stem cell transplant; Donor availability; Donor selection; Machine learning; BONE-MARROW; TRANSPLANTATION; CLASSIFICATION; SURVIVAL; MODEL; RACE;
D O I
10.1016/j.bbmt.2018.07.035
中图分类号
R5 [内科学];
学科分类号
1002 ; 100201 ;
摘要
The success of unrelated donor stem cell transplants depends on not only finding genetically matched donors, but also donor availability. On average 50% of potential donors in the National Marrow Donor Program database are unavailable for a variety of reasons, after initially matching a patient, with significant variations in availability among subgroups (eg, by race or age). Several studies have established univariate donor characteristics associated with availability. Individual consideration of each applicable characteristic is laborious. Extrapolating group averages to the individual-donor level tends to be highly inaccurate. In the current environment with enhanced donor data collection, we can make better estimates of individual donor availability. We propose a machine learning based approach to predict availability of every registered donor, and evaluate the predictive power on a test cohort of 44,544 requests to be .77 based on the area under the receiver-operating characteristic curve. We propose that this predictor should be used during donor selection to reduce the time to transplant. (C) 2018 American Society for Blood and Marrow Transplantation.
引用
收藏
页码:2425 / 2432
页数:8
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