An accessible two-dimensional solution nuclear magnetic resonance experiment on human ubiquitin

被引:3
|
作者
Rovnyak, D [1 ]
Thompson, LE [1 ]
机构
[1] Bucknell Univ, Dept Chem, Lewisburg, PA 17837 USA
关键词
human ubiquitin; solution-state nuclear magnetic resonance; heteronuclear single-quantum; correlation; direct detection;
D O I
10.1002/bmb.2005.494033022423
中图分类号
Q5 [生物化学]; Q7 [分子生物学];
学科分类号
071010 ; 081704 ;
摘要
Solution-state nuclear magnetic resonance (NMR) is an invaluable tool in structural and molecular biology research, but may be underutilized in undergraduate laboratories because instrumentation for performing structural studies of macromolecules in aqueous solutions is not yet widely available for use in undergraduate laboratories. We have implemented an experiment that is ideal for more commonly available 4.8-7.0 Tesla, double-channel NMR instruments that would not usually be used for biomolecular NMR work. We analyzed a commercially available, N-15-enriched human ubiquitin sample with a two-dimensional correlation experiment using indirect H-1 evolution and direct N-15 detection, which produced spectra with high resolution on a spectrometer operating at 7.0 Tesla (300 MHz H-1 resonance frequency). The simplicity of the experiment makes it possible to be configured by undergraduate students with minimal supervision from the instructor. Students gain experience in acquiring multidimensional biomolecular NMR experiments, confirm that ubiquitin is stably folded, and observe the correspondence between specific signals and individual amino acids in ubiquitin.
引用
收藏
页码:117 / 122
页数:6
相关论文
共 50 条
  • [31] Two-dimensional nuclear magnetic resonance method for wettability determination of tight sand
    Liang, Can
    Xiao, Lizhi
    Zhou, Cancan
    Zhang, Yan
    Liao, Guangzhi
    Jia, Zijian
    MAGNETIC RESONANCE IMAGING, 2019, 56 : 144 - 150
  • [32] A RETROSPECTION ON 10 YEARS OF TWO-DIMENSIONAL NUCLEAR MAGNETIC-RESONANCE SPECTROSCOPY
    BODENHAUSEN, G
    CHIMIA, 1984, 38 (06) : 215 - 218
  • [33] TWO-DIMENSIONAL NUCLEAR MAGNETIC-RESONANCE SPECTRA OF CELLULOSE AND CELLULOSE TRIACETATE
    KOWSAKA, K
    OKAJIMA, K
    KAMIDE, K
    POLYMER JOURNAL, 1988, 20 (12) : 1091 - 1099
  • [34] NUCLEAR MAGNETIC-RESONANCE INVESTIGATIONS OF TWO-DIMENSIONAL HE-3
    GODFRIN, H
    CANADIAN JOURNAL OF PHYSICS, 1987, 65 (11) : 1430 - 1434
  • [35] TWO-DIMENSIONAL NUCLEAR-MAGNETIC-RESONANCE SPECTRA OF SELECTED TRICYCLIC ANTIDEPRESSANTS
    CRAIK, DJ
    HALL, JG
    MUNRO, SLA
    CHEMICAL & PHARMACEUTICAL BULLETIN, 1987, 35 (01) : 188 - 194
  • [36] Probing Structural Compositions of Porous Media with Two-dimensional Nuclear Magnetic Resonance
    Huabing Liu
    Lizhi Xiao
    Huijun Yu
    Xin Li
    Baoxin Guo
    Zongfu Zhang
    Fangrong Zong
    Vladimir Anferov
    Sofia Anferova
    Applied Magnetic Resonance, 2013, 44 : 543 - 552
  • [37] OLIGOSACCHARIDE STRUCTURE BY TWO-DIMENSIONAL PROTON NUCLEAR-MAGNETIC-RESONANCE SPECTROSCOPY
    KOERNER, TAW
    PRESTEGARD, JH
    YU, RK
    METHODS IN ENZYMOLOGY, 1987, 138 : 38 - 59
  • [38] PROCESSING OF TWO-DIMENSIONAL NUCLEAR MAGNETIC-RESONANCE TIME DOMAIN SIGNALS
    DEBEER, R
    VANORMONDT, D
    PIJNAPPEL, WWF
    BOSMAN, TJL
    HILBERS, CW
    SIGNAL PROCESSING, 1988, 15 (03) : 293 - 302
  • [39] Artificial intelligence enhanced two-dimensional nanoscale nuclear magnetic resonance spectroscopy
    Xi Kong
    Leixin Zhou
    Zhijie Li
    Zhiping Yang
    Bensheng Qiu
    Xiaodong Wu
    Fazhan Shi
    Jiangfeng Du
    npj Quantum Information, 6
  • [40] Filtering techniques for efficient inversion of two-dimensional Nuclear Magnetic Resonance data
    Bortolotti, V.
    Brizi, L.
    Fantazzini, P.
    Landi, G.
    Zama, F.
    7TH INTERNATIONAL CONFERENCE ON NEW COMPUTATIONAL METHODS FOR INVERSE PROBLEMS, 2017, 904