Simulated single molecule microscopy with SMeagol

被引:22
|
作者
Linden, Martin [1 ]
Curic, Vladimir [1 ]
Boucharin, Alexis [1 ]
Fange, David [1 ]
Elf, Johan [1 ]
机构
[1] Uppsala Univ, Dept Cell & Mol Biol, Sci Life Lab, Uppsala, Sweden
基金
欧洲研究理事会;
关键词
LOCALIZATION MICROSCOPY; DYNAMICS;
D O I
10.1093/bioinformatics/btw109
中图分类号
Q5 [生物化学];
学科分类号
071010 ; 081704 ;
摘要
SMeagol is a software tool to simulate highly realistic microscopy data based on spatial systems biology models, in order to facilitate development, validation and optimization of advanced analysis methods for live cell single molecule microscopy data.
引用
收藏
页码:2394 / 2395
页数:2
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