Near-critical phenomena in intracellular metabolite pools

被引:81
|
作者
Elf, J [1 ]
Paulsson, J
Berg, OG
Ehrenberg, M
机构
[1] Uppsala Univ, Dept Cell & Mol Biol, BMC, S-75124 Uppsala, Sweden
[2] Princeton Univ, Dept Biol Mol, Princeton, NJ 08544 USA
[3] EBC, Dept Mol Evolut, S-75326 Uppsala, Sweden
关键词
D O I
10.1016/S0006-3495(03)74839-5
中图分类号
Q6 [生物物理学];
学科分类号
071011 ;
摘要
The supply and consumption of metabolites in living cells are catalyzed by enzymes. Here we consider two of the simplest schemes where one substrate is eliminated through Michaelis-Menten kinetics, and where two types of substrates are joined together by an enzyme. It is demonstrated how steady-state substrate concentrations can change ultrasensitively in response to changes in their supply rates and how this is coupled to slow relaxation back to steady state after a perturbation. In the one-substrate system, such near-critical behavior occurs when the supply rate approaches the maximal elimination rate, and in the two-substrate system it occurs when the rates of substrate supply are almost balanced. As systems that operate near criticality tend to display large random fluctuations, we also carried out a stochastic analysis using analytical approximations of master equations and compared the results with molecular-level Monte Carlo simulations. It was found that the significance, of random fluctuations was directly coupled to the steady-state sensitivity and that the two substrates can fluctuate greatly because they are anticorrelated in such a way that the product formation rate displays only small variation. Basic relations are highlighted and biological implications are discussed.
引用
收藏
页码:154 / 170
页数:17
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