Structure of the decoding center of the ribosome

被引:0
|
作者
Sergiev, PV
Lavrik, IN
Dokudovskaya, SS
Dontsova, OA [1 ]
Bogdanov, AA
机构
[1] Moscow MV Lomonosov State Univ, Belozersky Inst Physicochem Biol, Moscow 119899, Russia
[2] Moscow MV Lomonosov State Univ, Sch Chem, Moscow 119899, Russia
关键词
ribosome; decoding center; rRNA; ribosomal proteins; modeling;
D O I
暂无
中图分类号
Q5 [生物化学]; Q7 [分子生物学];
学科分类号
071010 ; 081704 ;
摘要
The decoding center of the ribosome provides mRNA translation and the fidelity of the codon-anticodon interactions along with mRNA translocation in the course of protein biosynthesis. The three-dimensional structure of the ribosome decoding center is still unknown. However, up to now a number of direct and indirect experimental data on the structural and functional organization of the decoding center have been obtained. In this paper the main components of the decoding center are described on the basis of our own experimental results combined with data from the literature. A model of their spatial arrangement at the small ribosomal subunit is suggested.
引用
收藏
页码:963 / 976
页数:14
相关论文
共 50 条
  • [21] Simulating movement of tRNA into the ribosome during decoding
    Sanbonmatsu, KY
    Joseph, S
    Tung, CS
    PROCEEDINGS OF THE NATIONAL ACADEMY OF SCIENCES OF THE UNITED STATES OF AMERICA, 2005, 102 (44) : 15854 - 15859
  • [22] The Ribosome Hypothesis: Decoding Mood Disorder Complexity
    Sharma, Vandana
    Swaminathan, Karthik
    Shukla, Rammohan
    INTERNATIONAL JOURNAL OF MOLECULAR SCIENCES, 2024, 25 (05)
  • [23] Evolutionary optimization of speed and accuracy of decoding on the ribosome
    Wohlgemuth, Ingo
    Pohl, Corinna
    Mittelstaet, Joerg
    Konevega, Andrey L.
    Rodnina, Marina V.
    PHILOSOPHICAL TRANSACTIONS OF THE ROYAL SOCIETY B-BIOLOGICAL SCIENCES, 2011, 366 (1580) : 2979 - 2986
  • [24] Decoding in the Absence of a Codon by tmRNA and SmpB in the Ribosome
    Neubauer, Cajetan
    Gillet, Reynald
    Kelley, Ann C.
    Ramakrishnan, V.
    SCIENCE, 2012, 335 (6074) : 1366 - 1369
  • [25] Movement of transfer RNA into the ribosome during decoding
    Sanbonmatsu, KY
    Tung, CS
    Joseph, S
    BIOPHYSICAL JOURNAL, 2005, 88 (01) : 193A - 193A
  • [26] Decoding by the ribosome: Energy landscapes and conformational changes
    Sanbonmatsu, Kevin Y.
    Vaiana, Andrea
    Joseph, Simpson
    Tung, Chang-Shung
    ABSTRACTS OF PAPERS OF THE AMERICAN CHEMICAL SOCIETY, 2007, 233
  • [27] QUALITY CONTROL OF mRNA DECODING ON THE BACTERIAL RIBOSOME
    Rodnina, Marina V.
    ADVANCES IN PROTEIN CHEMISTRY AND STRUCTURAL BIOLOGY, VOL 86: FIDELITY AND QUALITY CONTROL IN GENE EXPRESSION, 2012, 86 : 95 - 128
  • [28] Loss of rRNA modifications in the decoding center of the ribosome impairs translation and strongly delays pre-rRNA processing
    Liang, Xue-Hai
    Liu, Qing
    Fournier, Maurille J.
    RNA, 2009, 15 (09) : 1716 - 1728
  • [29] A computational workflow to determine drug candidates alternative to aminoglycosides targeting the decoding center of E. coli ribosome
    Yuce, Merve
    Ates, Beril
    Yasar, Nesrin Isil
    Sungur, Fethiye Aylin
    Kurkcuoglu, Ozge
    JOURNAL OF MOLECULAR GRAPHICS & MODELLING, 2024, 131
  • [30] RIBOSOME STRUCTURE
    BRIMACOMBE, R
    STOFFLER, G
    WITTMANN, HG
    ANNUAL REVIEW OF BIOCHEMISTRY, 1978, 47 : 217 - 249