MITOMAP: a human mitochondrial genome database - 2004 update

被引:0
|
作者
Brandon, MC [1 ]
Lott, MT
Nguyen, KC
Spolim, S
Navathe, SB
Baldi, P
Wallace, DC
机构
[1] Univ Calif Irvine, Dept Informat & Comp Sci, Irvine, CA 92697 USA
[2] Univ Calif Irvine, Inst Genom & Bioinformat, Irvine, CA 92697 USA
[3] Univ Calif Irvine, MAMMAG, Irvine, CA 92697 USA
[4] Georgia Inst Technol, Coll Comp, Atlanta, GA 30332 USA
关键词
D O I
暂无
中图分类号
Q5 [生物化学]; Q7 [分子生物学];
学科分类号
071010 ; 081704 ;
摘要
MITOMAP (http://www.MITOMAP.org), a database for the human mitochondrial genome, has grown rapidly in data content over the past several years as interest in the role of mitochondrial DNA (mtDNA) variation in human origins, forensics, degenerative diseases, cancer and aging has increased dramatically. To accommodate this information explosion, MITOMAP has implemented a new relational database and an improved search engine, and all programs have been rewritten. System administrative changes have been made to improve security and efficiency, and to make MITOMAP compatible with a new automatic mtDNA sequence analyzer known as Mitomaster.
引用
收藏
页码:D611 / D613
页数:3
相关论文
共 50 条
  • [21] The UCSC Genome Browser Database: 2008 update
    Karolchik, D.
    Kuhn, R. M.
    Baertsch, R.
    Barber, G. P.
    Clawson, H.
    Diekhans, M.
    Giardine, B.
    Harte, R. A.
    Hinrichs, A. S.
    Hsu, F.
    Kober, K. M.
    Miller, W.
    Pedersen, J. S.
    Pohl, A.
    Raney, B. J.
    Rhead, B.
    Rosenbloom, K. R.
    Smith, K. E.
    Stanke, M.
    Thakkapallayil, A.
    Trumbower, H.
    Wang, T.
    Zweig, A. S.
    Haussler, D.
    Kent, W. J.
    NUCLEIC ACIDS RESEARCH, 2008, 36 : D773 - D779
  • [22] The UCSC Genome Browser database: 2017 update
    Tyner, Cath
    Barber, Galt P.
    Casper, Jonathan
    Clawson, Hiram
    Diekhans, Mark
    Eisenhart, Christopher
    Fischer, Clayton M.
    Gibson, David
    Gonzalez, Jairo Navarro
    Guruvadoo, Luvina
    Haeussler, Maximilian
    Heitner, Steve
    Hinrichs, Angie S.
    Karolchik, Donna
    Lee, Brian T.
    Lee, Christopher M.
    Nejad, Parisa
    Raney, Brian J.
    Rosenbloom, Kate R.
    Speir, Matthew L.
    Villarreal, Chris
    Vivian, John
    Zweig, Ann S.
    Haussler, David
    Kuhn, Robert M.
    Kent, W. James
    NUCLEIC ACIDS RESEARCH, 2017, 45 (D1) : D626 - D634
  • [23] The UCSC Genome Browser database: 2015 update
    Rosenbloom, Kate R.
    Armstrong, Joel
    Barber, Galt P.
    Casper, Jonathan
    Clawson, Hiram
    Diekhans, Mark
    Dreszer, Timothy R.
    Fujita, Pauline A.
    Guruvadoo, Luvina
    Haeussler, Maximilian
    Harte, Rachel A.
    Heitner, Steve
    Hickey, Glenn
    Hinrichs, Angie S.
    Hubley, Robert
    Karolchik, Donna
    Learned, Katrina
    Lee, Brian T.
    Li, Chin H.
    Miga, Karen H.
    Nguyen, Ngan
    Paten, Benedict
    Raney, Brian J.
    Smit, Arian F. A.
    Speir, Matthew L.
    Zweig, Ann S.
    Haussler, David
    Kuhn, Robert M.
    Kent, W. James
    NUCLEIC ACIDS RESEARCH, 2015, 43 (D1) : D670 - D681
  • [24] The UCSC Genome Browser database: 2019 update
    Haeussler, Maximilian
    Zweig, Ann S.
    Tyner, Cath
    Speir, Matthew L.
    Rosenbloom, Kate R.
    Raney, Brian J.
    Lee, Christopher M.
    Lee, Brian T.
    Hinrichs, Angie S.
    Gonzalez, Jairo Navarro
    Gibson, David
    Diekhans, Mark
    Clawson, Hiram
    Casper, Jonathan
    Barber, Galt P.
    Haussler, David
    Kuhn, Robert M.
    Kent, W. James
    NUCLEIC ACIDS RESEARCH, 2019, 47 (D1) : D853 - D858
  • [25] CyanoBase: the cyanobacteria genome database update 2010
    Nakao, Mitsuteru
    Okamoto, Shinobu
    Kohara, Mitsuyo
    Fujishiro, Tsunakazu
    Fujisawa, Takatomo
    Sato, Shusei
    Tabata, Satoshi
    Kaneko, Takakazu
    Nakamura, Yasukazu
    NUCLEIC ACIDS RESEARCH, 2010, 38 : D379 - D381
  • [26] The UCSC Genome Browser Database: update 2009
    Kuhn, R. M.
    Karolchik, D.
    Zweig, A. S.
    Wang, T.
    Smith, K. E.
    Rosenbloom, K. R.
    Rhead, B.
    Raney, B. J.
    Pohl, A.
    Pheasant, M.
    Meyer, L.
    Hsu, F.
    Hinrichs, A. S.
    Harte, R. A.
    Giardine, B.
    Fujita, P.
    Diekhans, M.
    Dreszer, T.
    Clawson, H.
    Barber, G. P.
    Haussler, D.
    Kent, W. J.
    NUCLEIC ACIDS RESEARCH, 2009, 37 : D755 - D761
  • [27] The UCSC Genome Browser Database: Update 2007
    Kuhn, R. M.
    Karolchik, D.
    Zweig, A. S.
    Trumbower, H.
    Thomas, D. J.
    Thakkapallayil, A.
    Sugnet, C. W.
    Stanke, M.
    Smith, K. E.
    Siepel, A.
    Rosenbloom, K. R.
    Rhead, B.
    Raney, B. J.
    Pohl, A.
    Pedersen, J. S.
    Hsu, F.
    Hinrichs, A. S.
    Harte, R. A.
    Diekhans, M.
    Clawson, H.
    Bejerano, G.
    Barber, G. P.
    Baertsch, R.
    Haussler, D.
    Kent, W. J.
    NUCLEIC ACIDS RESEARCH, 2007, 35 : D668 - D673
  • [28] The UCSC Genome Browser database: 2016 update
    Speir, Matthew L.
    Zweig, Ann S.
    Rosenbloom, Kate R.
    Raney, Brian J.
    Paten, Benedict
    Nejad, Parisa
    Lee, Brian T.
    Learned, Katrina
    Karolchik, Donna
    Hinrichs, Angie S.
    Heitner, Steve
    Harte, Rachel A.
    Haeussler, Maximilian
    Guruvadoo, Luvina
    Fujita, Pauline A.
    Eisenhart, Christopher
    Diekhans, Mark
    Clawson, Hiram
    Casper, Jonathan
    Barber, Galt P.
    Haussler, David
    Kuhn, Robert M.
    Kent, W. James
    NUCLEIC ACIDS RESEARCH, 2016, 44 (D1) : D717 - D725
  • [29] The UCSC Genome Browser database: 2025 update
    Perez, Gerardo
    Barber, Galt P.
    Benet-Pages, Anna
    Casper, Jonathan
    Clawson, Hiram
    Diekhans, Mark
    Fischer, Clay
    Gonzalez, Jairo Navarro
    Hinrichs, Angie S.
    Lee, Christopher M.
    Nassar, Luis R.
    Raney, Brian J.
    Speir, Matthew L.
    van Baren, Marijke J.
    Vaske, Charles J.
    Haussler, David
    Kent, W. James
    Haeussler, Maximilian
    NUCLEIC ACIDS RESEARCH, 2024, 53 (D1) : D1243 - D1249
  • [30] The UCSC Genome Browser database: update 2010
    Rhead, Brooke
    Karolchik, Donna
    Kuhn, Robert M.
    Hinrichs, Angie S.
    Zweig, Ann S.
    Fujita, Pauline A.
    Diekhans, Mark
    Smith, Kayla E.
    Rosenbloom, Kate R.
    Raney, Brian J.
    Pohl, Andy
    Pheasant, Michael
    Meyer, Laurence R.
    Learned, Katrina
    Hsu, Fan
    Hillman-Jackson, Jennifer
    Harte, Rachel A.
    Giardine, Belinda
    Dreszer, Timothy R.
    Clawson, Hiram
    Barber, Galt P.
    Haussler, David
    Kent, W. James
    NUCLEIC ACIDS RESEARCH, 2010, 38 : D613 - D619