Multitask Learning With Recurrent Neural Networks for Acute Respiratory Distress Syndrome Prediction Using Only Electronic Health Record Data: Model Development and Validation Study
deep learning;
neural networks;
ARDS;
health care;
multitask learning;
clinical decision support;
prediction model;
COVID-19;
electronic health record;
risk outcome;
respiratory distress;
diagnostic criteria;
recurrent neural network;
EARLY IDENTIFICATION;
VENTILATION;
CRITERIA;
SCORE;
RISK;
D O I:
10.2196/36202
中图分类号:
R-058 [];
学科分类号:
摘要:
Background: Acute respiratory distress syndrome (ARDS) is a condition that is often considered to have broad and subjective diagnostic criteria and is associated with significant mortality and morbidity. Early and accurate prediction of ARDS and related conditions such as hypoxemia and sepsis could allow timely administration of therapies, leading to improved patient outcomes. Objective: The aim of this study is to perform an exploration of how multilabel classification in the clinical setting can take advantage of the underlying dependencies between ARDS and related conditions to improve early prediction of ARDS in patients. Methods: The electronic health record data set included 40,703 patient encounters from 7 hospitals from April 20, 2018, to March 17, 2021. A recurrent neural network (RNN) was trained using data from 5 hospitals, and external validation was conducted on data from 2 hospitals. In addition to ARDS, 12 target labels for related conditions such as sepsis, hypoxemia, and COVID-19 were used to train the model to classify a total of 13 outputs. As a comparator, XGBoost models were developed for each of the 13 target labels. Model performance was assessed using the area under the receiver operating characteristic curve. Heat maps to visualize attention scores were generated to provide interpretability to the neural networks. Finally, cluster analysis was performed to identify potential phenotypic subgroups of patients with ARDS. Results: The single RNN model trained to classify 13 outputs outperformed the individual XGBoost models for ARDS prediction, achieving an area under the receiver operating characteristic curve of 0.842 on the external test sets. Models trained on an increasing number of tasks resulted in improved performance. Earlier prediction of ARDS nearly doubled the rate of in-hospital survival. Cluster analysis revealed distinct ARDS subgroups, some of which had similar mortality rates but different clinical presentations. Conclusions: The RNN model presented in this paper can be used as an early warning system to stratify patients who are at risk of developing one of the multiple risk outcomes, hence providing practitioners with the means to take early action.
机构:
Northwestern Univ, Feinberg Sch Med, Med Scientist Training Program, Chicago, IL 60611 USA
Northwestern Univ, Dept Biomed Engn, Evanston, IL 60208 USANorthwestern Univ, Feinberg Sch Med, Med Scientist Training Program, Chicago, IL 60611 USA
Bechel, Meagan A.
Pah, Adam R.
论文数: 0引用数: 0
h-index: 0
机构:
Northwestern Univ, Northwestern Inst Complex Syst, Evanston, IL USA
Northwestern Univ, Kellogg Sch Management, Evanston, IL USANorthwestern Univ, Feinberg Sch Med, Med Scientist Training Program, Chicago, IL 60611 USA
Pah, Adam R.
Shi, Hanyu
论文数: 0引用数: 0
h-index: 0
机构:
Northwestern Univ, Dept Chem & Biol Engn, Evanston, IL USANorthwestern Univ, Feinberg Sch Med, Med Scientist Training Program, Chicago, IL 60611 USA
Shi, Hanyu
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机构:
Mehrotra, Sanjay
Persell, Stephen D.
论文数: 0引用数: 0
h-index: 0
机构:
Northwestern Univ, Feinberg Sch Med, Div Gen Internal Med & Geriatr, Chicago, IL 60611 USA
Northwestern Univ, Ctr Primary Care Innovat, Inst Publ Hlth & Med, Feinberg Sch Med, Chicago, IL 60611 USANorthwestern Univ, Feinberg Sch Med, Med Scientist Training Program, Chicago, IL 60611 USA
Persell, Stephen D.
Weiner, Shayna
论文数: 0引用数: 0
h-index: 0
机构:
Michigan Oncol Qual Consortium, Ann Arbor, MI USANorthwestern Univ, Feinberg Sch Med, Med Scientist Training Program, Chicago, IL 60611 USA
Weiner, Shayna
Wunderink, Richard G.
论文数: 0引用数: 0
h-index: 0
机构:
Northwestern Univ, Feinberg Sch Med, Div Pulm & Crit Care Med, Chicago, IL 60611 USANorthwestern Univ, Feinberg Sch Med, Med Scientist Training Program, Chicago, IL 60611 USA
Wunderink, Richard G.
Amaral, Luis A. Nunes
论文数: 0引用数: 0
h-index: 0
机构:
Northwestern Univ, Northwestern Inst Complex Syst, Evanston, IL USA
Northwestern Univ, Dept Chem & Biol Engn, Evanston, IL USA
Northwestern Univ, Dept Phys & Astron, Evanston, IL USANorthwestern Univ, Feinberg Sch Med, Med Scientist Training Program, Chicago, IL 60611 USA
Amaral, Luis A. Nunes
Weiss, Curtis H.
论文数: 0引用数: 0
h-index: 0
机构:
NorthShore Univ HealthSyst, Div Pulm Crit Care Allergy & Immunol, Evanston, IL 60201 USANorthwestern Univ, Feinberg Sch Med, Med Scientist Training Program, Chicago, IL 60611 USA
机构:
NorthShore Univ, Dept Med, HealthSyst Res Inst, Evanston, IL USA
Univ Chicago, Pritzker Sch Med, Dept Family Med, Chicago, IL USANorthShore Univ, Dept Med, HealthSyst Res Inst, Evanston, IL USA
Martin, Alfred
Bauer, Victoria
论文数: 0引用数: 0
h-index: 0
机构:
NorthShore Univ, Dept Med, HealthSyst Res Inst, Evanston, IL USANorthShore Univ, Dept Med, HealthSyst Res Inst, Evanston, IL USA
Bauer, Victoria
Datta, Avisek
论文数: 0引用数: 0
h-index: 0
机构:
NorthShore Univ, Dept Med, HealthSyst Res Inst, Evanston, IL USANorthShore Univ, Dept Med, HealthSyst Res Inst, Evanston, IL USA
Datta, Avisek
Masi, Christopher
论文数: 0引用数: 0
h-index: 0
机构:
Emory Univ, Sch Med, Dept Med, Atlanta, GA USANorthShore Univ, Dept Med, HealthSyst Res Inst, Evanston, IL USA
Masi, Christopher
Mosnaim, Giselle
论文数: 0引用数: 0
h-index: 0
机构:
NorthShore Univ, Dept Med, HealthSyst Res Inst, Evanston, IL USA
Univ Chicago, Pritzker Sch Med, Dept Family Med, Chicago, IL USANorthShore Univ, Dept Med, HealthSyst Res Inst, Evanston, IL USA
Mosnaim, Giselle
Solomonides, Anthony
论文数: 0引用数: 0
h-index: 0
机构:
NorthShore Univ, Dept Med, HealthSyst Res Inst, Evanston, IL USANorthShore Univ, Dept Med, HealthSyst Res Inst, Evanston, IL USA
Solomonides, Anthony
Rao, Goutham
论文数: 0引用数: 0
h-index: 0
机构:
Case Western Reserve Univ, Dept Family Med, Univ Hosp, Cleveland, OH 44106 USANorthShore Univ, Dept Med, HealthSyst Res Inst, Evanston, IL USA
机构:
Vanderbilt Univ, Med Ctr, Div Allergy Pulm & Crit Care Med, Nashville, TN USAVanderbilt Univ, Med Ctr, Div Allergy Pulm & Crit Care Med, Nashville, TN USA
Kerchberger, V. E.
Bastarache, J. A.
论文数: 0引用数: 0
h-index: 0
机构:
Vanderbilt Univ, Med Ctr, Div Allergy Pulm & Crit Care Med, Nashville, TN USAVanderbilt Univ, Med Ctr, Div Allergy Pulm & Crit Care Med, Nashville, TN USA
Bastarache, J. A.
Shaver, C. M.
论文数: 0引用数: 0
h-index: 0
机构:
Vanderbilt Univ, Med Ctr, Div Allergy Pulm & Crit Care Med, Nashville, TN USAVanderbilt Univ, Med Ctr, Div Allergy Pulm & Crit Care Med, Nashville, TN USA
Shaver, C. M.
McNeil, J. B.
论文数: 0引用数: 0
h-index: 0
机构:
Vanderbilt Univ, Med Ctr, Div Allergy Pulm & Crit Care Med, Nashville, TN USAVanderbilt Univ, Med Ctr, Div Allergy Pulm & Crit Care Med, Nashville, TN USA
McNeil, J. B.
Wang, C. T.
论文数: 0引用数: 0
h-index: 0
机构:
Vanderbilt Univ, Med Ctr, Div Allergy Pulm & Crit Care Med, Nashville, TN USAVanderbilt Univ, Med Ctr, Div Allergy Pulm & Crit Care Med, Nashville, TN USA
Wang, C. T.
Zheng, N. S.
论文数: 0引用数: 0
h-index: 0
机构:
Vanderbilt Univ, Med Ctr, Dept Biomed Informat, Nashville, TN USAVanderbilt Univ, Med Ctr, Div Allergy Pulm & Crit Care Med, Nashville, TN USA
Zheng, N. S.
Tapdiya, A.
论文数: 0引用数: 0
h-index: 0
机构:
Vanderbilt Univ, Med Ctr, Dept Biomed Informat, Nashville, TN USAVanderbilt Univ, Med Ctr, Div Allergy Pulm & Crit Care Med, Nashville, TN USA
Tapdiya, A.
Wei, W.
论文数: 0引用数: 0
h-index: 0
机构:
Vanderbilt Univ, Med Ctr, Dept Biomed Informat, Nashville, TN USAVanderbilt Univ, Med Ctr, Div Allergy Pulm & Crit Care Med, Nashville, TN USA
Wei, W.
Ware, L. B.
论文数: 0引用数: 0
h-index: 0
机构:
Vanderbilt Univ, Med Ctr, Div Allergy Pulm & Crit Care Med, Nashville, TN USAVanderbilt Univ, Med Ctr, Div Allergy Pulm & Crit Care Med, Nashville, TN USA
机构:
Southwest Med Univ, Affiliated Hosp, Dept Gastroenterol, St Taiping 25, Luzhou 646099, Sichuan, Peoples R China
Nucl Med & Mol Imaging Key Lab Sichuan Prov, Luzhou, Peoples R ChinaSouthwest Med Univ, Affiliated Hosp, Dept Gastroenterol, St Taiping 25, Luzhou 646099, Sichuan, Peoples R China
Zou, Kang
Ren, Wensen
论文数: 0引用数: 0
h-index: 0
机构:
Southwest Med Univ, Affiliated Hosp, Dept Gastroenterol, St Taiping 25, Luzhou 646099, Sichuan, Peoples R China
Nucl Med & Mol Imaging Key Lab Sichuan Prov, Luzhou, Peoples R ChinaSouthwest Med Univ, Affiliated Hosp, Dept Gastroenterol, St Taiping 25, Luzhou 646099, Sichuan, Peoples R China
Ren, Wensen
Huang, Shu
论文数: 0引用数: 0
h-index: 0
机构:
Peoples Hosp Lianshui, Dept Gastroenterol, Huaian, Peoples R ChinaSouthwest Med Univ, Affiliated Hosp, Dept Gastroenterol, St Taiping 25, Luzhou 646099, Sichuan, Peoples R China
Huang, Shu
Jiang, Jiao
论文数: 0引用数: 0
h-index: 0
机构:
Southwest Med Univ, Affiliated Hosp, Dept Gastroenterol, St Taiping 25, Luzhou 646099, Sichuan, Peoples R China
Nucl Med & Mol Imaging Key Lab Sichuan Prov, Luzhou, Peoples R ChinaSouthwest Med Univ, Affiliated Hosp, Dept Gastroenterol, St Taiping 25, Luzhou 646099, Sichuan, Peoples R China
Jiang, Jiao
Xu, Huan
论文数: 0引用数: 0
h-index: 0
机构:
Southwest Med Univ, Affiliated Hosp, Dept Gastroenterol, St Taiping 25, Luzhou 646099, Sichuan, Peoples R China
Nucl Med & Mol Imaging Key Lab Sichuan Prov, Luzhou, Peoples R ChinaSouthwest Med Univ, Affiliated Hosp, Dept Gastroenterol, St Taiping 25, Luzhou 646099, Sichuan, Peoples R China
Xu, Huan
Zeng, Xinyi
论文数: 0引用数: 0
h-index: 0
机构:
Southwest Med Univ, Affiliated Hosp, Dept Gastroenterol, St Taiping 25, Luzhou 646099, Sichuan, Peoples R China
Nucl Med & Mol Imaging Key Lab Sichuan Prov, Luzhou, Peoples R ChinaSouthwest Med Univ, Affiliated Hosp, Dept Gastroenterol, St Taiping 25, Luzhou 646099, Sichuan, Peoples R China
Zeng, Xinyi
Zhang, Han
论文数: 0引用数: 0
h-index: 0
机构:
Southwest Med Univ, Affiliated Hosp, Dept Gastroenterol, St Taiping 25, Luzhou 646099, Sichuan, Peoples R China
Nucl Med & Mol Imaging Key Lab Sichuan Prov, Luzhou, Peoples R ChinaSouthwest Med Univ, Affiliated Hosp, Dept Gastroenterol, St Taiping 25, Luzhou 646099, Sichuan, Peoples R China
Zhang, Han
Peng, Yan
论文数: 0引用数: 0
h-index: 0
机构:
Southwest Med Univ, Affiliated Hosp, Dept Gastroenterol, St Taiping 25, Luzhou 646099, Sichuan, Peoples R China
Nucl Med & Mol Imaging Key Lab Sichuan Prov, Luzhou, Peoples R ChinaSouthwest Med Univ, Affiliated Hosp, Dept Gastroenterol, St Taiping 25, Luzhou 646099, Sichuan, Peoples R China
Peng, Yan
Lue, Muhan
论文数: 0引用数: 0
h-index: 0
机构:
Southwest Med Univ, Affiliated Hosp, Dept Gastroenterol, St Taiping 25, Luzhou 646099, Sichuan, Peoples R China
Nucl Med & Mol Imaging Key Lab Sichuan Prov, Luzhou, Peoples R ChinaSouthwest Med Univ, Affiliated Hosp, Dept Gastroenterol, St Taiping 25, Luzhou 646099, Sichuan, Peoples R China
Lue, Muhan
Tang, Xiaowei
论文数: 0引用数: 0
h-index: 0
机构:
Southwest Med Univ, Affiliated Hosp, Dept Gastroenterol, St Taiping 25, Luzhou 646099, Sichuan, Peoples R China
Nucl Med & Mol Imaging Key Lab Sichuan Prov, Luzhou, Peoples R ChinaSouthwest Med Univ, Affiliated Hosp, Dept Gastroenterol, St Taiping 25, Luzhou 646099, Sichuan, Peoples R China