Use of 18S, 16S rDNA and cytochrome c oxidase sequences in earthworm taxonomy (Oligochaeta, Lumbricidae)

被引：24
|
作者：
Pop, AA
Wink, M
Pop, VV
机构：
[1] Inst Biol Res, Cluj Napoca 3400, Romania
[2] Heidelberg Univ, Inst Pharmaceut Biol, Heidelberg, Germany
来源：
PEDOBIOLOGIA | 2003年 / 47卷 / 5-6期
关键词：
18S rDNA; 16S rDNA; cytochrome c oxidase; earthworms; Lumbricidae; taxonomy;
D O I：
10.1078/0031-4056-00208
中图分类号：
Q14 [生态学（生物生态学）];
学科分类号：
071012 ; 0713 ;
摘要：
Molecular methods are expected to provide new and more precise means in delimiting genera as well as in establishing phylogenetic relationships among earthworm species. A multigene attempt aiming to evaluate the diagnostic value of the different genes is presented. Complete sequences for nucleic 18S rDNA of 3 earthworm species, partial sequences for ribosomal 16S rDNA of 18 species and 1 subspecies and subunit one for mitochondrial cytochrome c oxidase (COI) for 19 taxa were obtained. Nucleotide sequences of genes were used to reconstruct molecular phylogeny with maximum parsimony. These molecular data are considered as complementary diagnostic characters partially fitting the traditional species grouping into different taxonomic systems.
引用
收藏
页码：428 / 433
页数：6
相关论文
共 50 条
  • [41] Phylogeny of coral-inhabiting barnacles (Cirripedia; Thoracica; Pyrgomatidae) based on 12S, 16S and 18S rDNA analysis
    Simon-Blecher, N.
    Huchon, D.
    Achituv, Y.
    MOLECULAR PHYLOGENETICS AND EVOLUTION, 2007, 44 (03) : 1333 - 1341
  • [42] 16S and 18S metagenomics analysis of fouling residues from aquaculture
    Tveten, A. K.
    NEW BIOTECHNOLOGY, 2018, 44 : S8 - S8
  • [43] Phylogenetic relationships of Japanese cuttlefishes inferred from mitochondrial 16s rDNA gene and cytochrome C oxidase subunit I gene
    Yoshida, Masaaki
    Tsuneki, Kazuhiko
    Furuya, Hidetaka
    ZOOLOGICAL SCIENCE, 2004, 21 (12) : 1270 - 1270
  • [44] Phylogenetic analysis of the genus Thermoactinomyces based on 16S rDNA sequences
    Yoon, JH
    Park, YH
    INTERNATIONAL JOURNAL OF SYSTEMATIC AND EVOLUTIONARY MICROBIOLOGY, 2000, 50 : 1081 - 1086
  • [45] Identification of Mytilus spp. and Pecten maximus in Irish waters by standard PCR of the 18S rDNA gene and multiplex PCR of the 16S rDNA gene
    Bendezu, IF
    Slater, JW
    Carney, BF
    MARINE BIOTECHNOLOGY, 2005, 7 (06) : 687 - 696
  • [46] Signature region within the 16S rDNA sequences of Aeromonas popoffii
    Demarta, A
    Tonolla, M
    Caminada, AP
    Ruggeri, N
    Peduzzi, R
    FEMS MICROBIOLOGY LETTERS, 1999, 172 (02) : 239 - 246
  • [47] Identification of Mytilus spp. and Pecten maximus in Irish Waters by Standard PCR of the 18S rDNA Gene and Multiplex PCR of the 16S rDNA Gene
    Ivan F. Bendezu
    John W. Slater
    Brian F. Carney
    Marine Biotechnology, 2005, 7 : 687 - 696
  • [48] 16S and 18S rDNA Amplicon Sequencing Analysis of Aesthetically Problematic Microbial Mats on the Walls of the Petralona Cave: The Use of Essential Oils as a Cleaning Method
    Tsouggou, Natalia
    Oikonomou, Alexandra
    Papadimitriou, Konstantinos
    Skandamis, Panagiotis N.
    MICROORGANISMS, 2023, 11 (11)
  • [49] Molecular characterization and phylogeny of Linguatula serrata (Pentastomida: Linguatulidae) based on the nuclear 18S rDNA and mitochondrial cytochrome c oxidase I gene
    Mohanta, Uday Kumar
    Itagaki, Tadashi
    JOURNAL OF VETERINARY MEDICAL SCIENCE, 2017, 79 (02):
  • [50] PHYLOGENETIC POSITION OF THE DICYEMID MESOZOA INFERRED FROM 18S RDNA SEQUENCES
    KATAYAMA, T
    WADA, H
    FURUYA, H
    SATOH, N
    YAMAMOTO, M
    BIOLOGICAL BULLETIN, 1995, 189 (02): : 81 - 90
12345