Complete mitochondrial genome of the ghost crab Ocypode stimpsoni Ortmann, 1897 (Brachyura: Decapoda: Ocypodidae) and its phylogenetic relationship in Brachyura

被引:4
|
作者
Kim, Hanul [1 ]
Jung, Jongwoo [1 ,2 ]
机构
[1] Ewha Womans Univ, Interdisciplinary Program Ecocreat, Seoul, South Korea
[2] Ewha Womans Univ, Dept Sci Educ, Seoul 03760, South Korea
来源
MITOCHONDRIAL DNA PART B-RESOURCES | 2020年 / 5卷 / 02期
关键词
Brachyura; Ocypode stimpsoni; mitochondrial genome; phylogenetic analysis;
D O I
10.1080/23802359.2020.1749160
中图分类号
Q3 [遗传学];
学科分类号
071007 ; 090102 ;
摘要
In this paper, we analyzed the complete mitochondrial genome sequence of Ocypode stimpsoni. Whole-genome sequencing was performed using the MGISEQ-2000 platform. The length of the complete mitochondrial genome was 15,557 bp, and data were submitted to NCBI (MN917464). The genome consisted of 67.8% A + T bias, it included 13 protein-coding genes (PCGs), two rRNA genes, 22 tRNA genes, and a putative control region. The phylogenetic tree was constructed based on sequences of 13 PCGs identified by the maximum likelihood (ML) method. Collectively, the results support the original taxonomy assigned, O. stimpsoni belongs to Ocypodidae, Ocypodoidea. In addition, species in Ocypodoidea and Grapsoidea have a reciprocal paraphyly relationship, as demonstrated in previous studies.
引用
收藏
页码:1699 / 1700
页数:2
相关论文
共 50 条
  • [31] Characterization of the complete mitochondria genome of Xanthid crab, Atergatis integerrimus from China (Decapoda: Brachyura) and its phylogenetic analysis
    Xie, Zhuofang
    Tan, Huaqiang
    Lin, Fan
    Guan, Mengyun
    Waiho, Khor
    Fang, Shaobin
    Ikhwanuddin, Mhd
    Fazhan, Hanafiah
    Ma, Hongyu
    MITOCHONDRIAL DNA PART B-RESOURCES, 2018, 3 (01): : 397 - 398
  • [32] On the sex ratio of the painted ghost crab Ocypode gaudichaudii H. Milne!Edwards & Lucas, 1843 (brachyura, ocypodidae)
    Trott, TJ
    CRUSTACEANA, 1998, 71 : 47 - 56
  • [33] Morphometric study of the ghost crab Ocypode quadrata (Fabricius, 1887) (brachyura, ocypodidae) from Ubatuba, Sao Paulo, Brazil
    Fransozo, A
    Negreiros-Fransozo, ML
    Bertini, G
    MODERN APPROACHES TO THE STUDY OF CRUSTACEA, 2002, : 189 - 195
  • [34] Characterization of the complete mitochondrial genome of Helice latimera and its phylogenetic implications in Brachyura
    Tang, Ying-Yu
    Tang, Bo-Ping
    Xin, Zhao-Zhe
    Li, Yue-Tian
    Zha, Xiao-Han
    Zhang, Dai-Zhen
    Sun, Yue
    Liu, Qiu-Ning
    Ma, Yun-Fei
    GENOMICS, 2020, 112 (06) : 5180 - 5187
  • [35] Microplastic Presence in the Mangrove Crab Ucides occidentalis (Brachyura: Ocypodidae) (Ortmann, 1897) Derived From Local Markets in Tumbes, Peru
    Aguirre-Sanchez, Angelica
    Purca, Sara
    Indacochea, Aldo G.
    AIR SOIL AND WATER RESEARCH, 2022, 15
  • [36] Microplastic Presence in the Mangrove Crab Ucides occidentalis (Brachyura: Ocypodidae) (Ortmann, 1897) Derived From Local Markets in Tumbes, Peru
    Aguirre-Sanchez, Angelica
    Purca, Sara
    Indacochea, Aldo G. G.
    AIR SOIL AND WATER RESEARCH, 2022, 15
  • [37] The complete mitochondrial genome of the freshwater crab Bottapotamon lingchuanense Turkay and Dai 1997 (Decapoda: Brachyura: Potamoidea)
    Wang, Yi-fan
    Yang, Qian
    Xu, Shu-xin
    Zhao, Meng-jun
    Zou, Jie-xin
    MITOCHONDRIAL DNA PART B-RESOURCES, 2021, 6 (04): : 1554 - 1556
  • [38] New species of freshwater crab genus Kingsleya Ortmann, 1897 (Decapoda: Brachyura: Pseudothelphusidae) from Piaui, northeastern Brazil
    Pralon, Bruno
    Pinheiro, Allysson P.
    Santana, William
    NAUPLIUS, 2020, 28
  • [39] USE OF MORPHOMETRIC DATA AS A GUIDE TO REPRODUCTIVE MATURITY IN GHOST-CRAB, OCYPODE-CERATOPHTHALMUS (PALLAS) (BRACHYURA-OCYPODIDAE)
    HALEY, SR
    PACIFIC SCIENCE, 1973, 27 (04) : 350 - 362
  • [40] The complete mitochondrial genome of the freshwater crabChinapotamon maolanense(Decapoda: Brachyura: Potamoidea)
    Cui, Ying-yi
    Shi, Lin-bo
    Ji, Wen-bin
    Xu, Shu-xin
    Zhu, Chun-chao
    Zhou, Xian-min
    Zou, Jie-xin
    MITOCHONDRIAL DNA PART B-RESOURCES, 2020, 5 (03): : 2357 - 2359