Allele frequency covariance among cohorts and its use in estimating effective size of age-structured populations

被引：19

作者：

Jorde, Per Erik ^{[1
]}

机构：

[1] Univ Oslo, Ctr Ecol & Evolutionary Synth CEES, N-0316 Oslo, Norway

来源：

MOLECULAR ECOLOGY RESOURCES | 2012年 / 12卷 / 03期

关键词：

effective population size; overlapping generations; temporal method; GENETIC DRIFT;

D O I：

10.1111/j.1755-0998.2011.03111.x

中图分类号：

Q5 [生物化学]; Q7 [分子生物学];

学科分类号：

071010 ; 081704 ;

摘要：

A general expression for the covariance of allele frequencies among cohorts in age-structured populations is derived. The expression is used to extend the so-called temporal method for estimating effective population size from allele frequency shifts among samples from cohorts born any number of years apart. Computer simulations are used to check on the accuracy and precision of the method, and an application to coastal Atlantic cod is presented.

引用

页码：476 / 480

页数：5

共 31 条

[21] Frequency content of environmental variability and extinction risk of age-structured populations: Chinook salmon (Oncorhynchus tschawytscha) as an example
D. Patrick Kilduff
Louis W. Botsford
Lisa C. Thompson
Theoretical Ecology, 2019, 12 : 145 - 154
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[25] USE OF SIZE-FREQUENCY DATA TO ESTIMATE THE AGE COMPOSITION OF CRAYFISH POPULATIONS
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[26] Estimating local outbreak risks and the effects of non-pharmaceutical interventions in age-structured populations: SARS-CoV-2 as a case study
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JOURNAL OF THEORETICAL BIOLOGY, 2022, 535
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BIOLOGICAL JOURNAL OF THE LINNEAN SOCIETY, 1996, 58 (02) : 173 - 195
[28] Estimating effective population size (Ne) from allele frequency changes in Bavarian Simmental (FV) and Tyrolean Grey (GV) cattle
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Annie E. Schmidt
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D. Patrick Kilduff
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Jaime Jahncke
John M. Eadie
Theoretical Ecology, 2018, 11 : 367 - 377
[30] Changing environmental spectra influence age-structured populations: increasing ENSO frequency could diminish variance and extinction risk in long-lived seabirds
Schmidt, Annie E.
Botsford, Louis W.
Kilduff, D. Patrick
Bradley, Russell W.
Jahncke, Jaime
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THEORETICAL ECOLOGY, 2018, 11 (03) : 367 - 377

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