RETRACTED: Multi-scale Inference of Interaction Rules in Animal Groups Using Bayesian Model Selection (Retracted Article)

被引:23
|
作者
Mann, Richard P. [1 ]
Perna, Andrea [1 ]
Strombom, Daniel [1 ]
Garnett, Roman [2 ]
Herbert-Read, James E. [3 ]
Sumpter, David J. T. [1 ]
Ward, Ashley J. W. [3 ]
机构
[1] Uppsala Univ, Dept Math, S-75238 Uppsala, Sweden
[2] Carnegie Mellon Univ, Inst Robot, Pittsburgh, PA 15213 USA
[3] Univ Sydney, Sch Biol Sci, Sydney, NSW 2006, Australia
关键词
PHASE-TRANSITION; COLLECTIVE BEHAVIOR; MOTION;
D O I
10.1371/journal.pcbi.1002308
中图分类号
Q5 [生物化学];
学科分类号
071010 ; 081704 ;
摘要
Inference of interaction rules of animals moving in groups usually relies on an analysis of large scale system behaviour. Models are tuned through repeated simulation until they match the observed behaviour. More recent work has used the fine scale motions of animals to validate and fit the rules of interaction of animals in groups. Here, we use a Bayesian methodology to compare a variety of models to the collective motion of glass prawns (Paratya australiensis). We show that these exhibit a stereotypical 'phase transition', whereby an increase in density leads to the onset of collective motion in one direction. We fit models to this data, which range from: a mean-field model where all prawns interact globally; to a spatial Markovian model where prawns are self-propelled particles influenced only by the current positions and directions of their neighbours; up to non-Markovian models where prawns have 'memory' of previous interactions, integrating their experiences over time when deciding to change behaviour. We show that the mean-field model fits the large scale behaviour of the system, but does not capture fine scale rules of interaction, which are primarily mediated by physical contact. Conversely, the Markovian self-propelled particle model captures the fine scale rules of interaction but fails to reproduce global dynamics. The most sophisticated model, the non-Markovian model, provides a good match to the data at both the fine scale and in terms of reproducing global dynamics. We conclude that prawns' movements are influenced by not just the current direction of nearby conspecifics, but also those encountered in the recent past. Given the simplicity of prawns as a study system our research suggests that self-propelled particle models of collective motion should, if they are to be realistic at multiple biological scales, include memory of previous interactions and other non-Markovian effects.
引用
收藏
页数:12
相关论文
共 50 条
  • [1] Multi-scale Inference of Interaction Rules in Animal Groups Using Bayesian Model Selection
    Mann, Richard P.
    Perna, Andrea
    Strombom, Daniel
    Garnett, Roman
    Herbert-Read, James E.
    Sumpter, David J. T.
    Ward, Ashley J. W.
    [J]. PLOS COMPUTATIONAL BIOLOGY, 2013, 9 (03)
  • [2] RETRACTED: Bayesian Inference of Mixture Model via Differential Evolution and Sampling (Retracted Article)
    Guo, Peng
    Li, Naixiang
    [J]. 2ND IEEE INTERNATIONAL CONFERENCE ON ADVANCED COMPUTER CONTROL (ICACC 2010), VOL. 4, 2010, : 504 - 508
  • [3] Bayesian Inference for Identifying Interaction Rules in Moving Animal Groups
    Mann, Richard P.
    [J]. PLOS ONE, 2011, 6 (08):
  • [4] RETRACTED: Using Bayesian Network and AIS to Perform Feature Subset Selection (Retracted Article)
    Zhang, Boyun
    [J]. EMERGING INTELLIGENT COMPUTING TECHNOLOGY AND APPLICATIONS: WITH ASPECTS OF ARTIFICIAL INTELLIGENCE, 2009, 5755 : 573 - 580
  • [5] RETRACTED: Multi-scale Characteristic and Mutation Analysis of Precipitation and Evaporation Series in Yuyang (Retracted Article)
    Wang Huaqi
    Zhang Maosheng
    Dang Xueya
    [J]. 2011 INTERNATIONAL CONFERENCE ON ENERGY AND ENVIRONMENTAL SCIENCE-ICEES 2011, 2011, 11 : 2895 - 2900
  • [6] RETRACTED: Diesel Engine Air Tightness Feature Recognitionbased on Multi-scale Analysis (Retracted Article)
    Song, Xiaojie
    Liu, Wei
    Tan, Boxue
    [J]. 2011 INTERNATIONAL CONFERENCE ON ENERGY AND ENVIRONMENTAL SCIENCE-ICEES 2011, 2011, 11 : 1212 - 1216
  • [7] RETRACTED: Multi feature drug compound analysis model for efficient success rate prediction using fuzzy rules (Retracted Article)
    Dinakaran, S.
    Anitha, P.
    [J]. JOURNAL OF AMBIENT INTELLIGENCE AND HUMANIZED COMPUTING, 2021, 12 (06) : 6557 - 6565
  • [8] RETRACTED: Experimental study and theoretical modeling for the flexural property of multi-scale hybrid fiber reinforced SHCC (Retracted Article)
    Zhang, Yubin
    Wu, Lishan
    Bao, Shihui
    Zhang, Cong
    Bangi, Toshiyuki
    [J]. CASE STUDIES IN CONSTRUCTION MATERIALS, 2022, 16
  • [9] RETRACTED: Surface Defect Detection and Recognition Method for Multi-Scale Commutator Based on Deep Transfer Learning (Retracted Article)
    Shu, Yufeng
    Li, Bin
    [J]. ARABIAN JOURNAL FOR SCIENCE AND ENGINEERING, 2023, 48 (03) : 4127 - 4127
  • [10] RETRACTED: Classical and Bayesian Inference of Marshall-Olkin Extended Gompertz Makeham Model with Modeling of Physics Data (Retracted Article)
    Mohamed, Rania A. H.
    Al-Babtain, Abdulhakim A.
    Elbatal, I.
    Almetwally, Ehab M.
    Almongy, Hisham M.
    [J]. JOURNAL OF MATHEMATICS, 2022, 2022