An ensemble of filters and classifiers for microarray data classification

被引:127
|
作者
Bolon-Canedo, V. [1 ]
Sanchez-Marono, N. [1 ]
Alonso-Betanzos, A. [1 ]
机构
[1] Univ A Coruna, Dept Comp Sci, Lab Res & Dev Artificial Intelligence LIDIA, La Coruna 15071, Spain
关键词
Feature selection; Ensemble methods for classification; Microarray data sets; GENE SELECTION; CANCER; TUMOR; PREDICTION; PATTERNS;
D O I
10.1016/j.patcog.2011.06.006
中图分类号
TP18 [人工智能理论];
学科分类号
081104 ; 0812 ; 0835 ; 1405 ;
摘要
In this paper a new framework for feature selection consisting of an ensemble of filters and classifiers is described. Five filters, based on different metrics, were employed. Each filter selects a different subset of features which is used to train and to test a specific classifier. The outputs of these five classifiers are combined by simple voting. In this study three well-known classifiers were employed for the classification task: C4.5, naive-Bayes and IB1. The rationale of the ensemble is to reduce the variability of the features selected by filters in different classification domains. Its adequacy was demonstrated by employing 10 microarray data sets. (C) 2011 Elsevier Ltd. All rights reserved.
引用
收藏
页码:531 / 539
页数:9
相关论文
共 50 条
  • [41] Bagging and Boosting Ensemble Classifiers for Classification of Multispectral, Hyperspectral and PolSAR Data: A Comparative Evaluation
    Jafarzadeh, Hamid
    Mahdianpari, Masoud
    Gill, Eric
    Mohammadimanesh, Fariba
    Homayouni, Saeid
    [J]. REMOTE SENSING, 2021, 13 (21)
  • [42] An ensemble of the distance-based and Naive Bayes classifiers for the online classification with data reduction
    Jedrzejowicz, Joanna
    Jedrzejowicz, Piotr
    [J]. JOURNAL OF INTELLIGENT & FUZZY SYSTEMS, 2017, 32 (02) : 1289 - 1296
  • [43] A balanced ensemble approach to weighting classifiers for text classification
    Fung, Gabriel Pui Cheong
    Yu, Jeffrey Xu
    Wang, Haixun
    Cheung, David W.
    Liu, Huan
    [J]. ICDM 2006: SIXTH INTERNATIONAL CONFERENCE ON DATA MINING, PROCEEDINGS, 2006, : 869 - 873
  • [44] Ensemble of multiple kNN classifiers for societal risk classification
    Jindong Chen
    Xijin Tang
    [J]. Journal of Systems Science and Systems Engineering, 2017, 26 : 433 - 447
  • [45] ANALYSIS OF VHR IMAGE CLASSIFICATION BY SINGLE AND ENSEMBLE OF CLASSIFIERS
    Lacerda, M. G.
    Shiguemori, E. H.
    Damiao, A. J.
    Anjos, C. S.
    Habermann, M.
    [J]. 2020 IEEE LATIN AMERICAN GRSS & ISPRS REMOTE SENSING CONFERENCE (LAGIRS), 2020, : 126 - 131
  • [46] Classification of Pollen Grain Images Based on an Ensemble of Classifiers
    Arias, David Gutierrez
    Mussel Cirne, Marcos Vinicius
    Chire Saire, Josimar Edinson
    Pedrini, Helio
    [J]. 2017 16TH IEEE INTERNATIONAL CONFERENCE ON MACHINE LEARNING AND APPLICATIONS (ICMLA), 2017, : 234 - 240
  • [47] Automatic music genre classification using ensemble of classifiers
    Silla, Carlos N., Jr.
    Kaestner, Celso A. A.
    Koerich, Alessandro L.
    [J]. 2007 IEEE INTERNATIONAL CONFERENCE ON SYSTEMS, MAN AND CYBERNETICS, VOLS 1-8, 2007, : 3336 - +
  • [48] ENSEMBLE OF MULTIPLE kNN CLASSIFIERS FOR SOCIETAL RISK CLASSIFICATION
    Chen, Jindong
    Tang, Xijin
    [J]. JOURNAL OF SYSTEMS SCIENCE AND SYSTEMS ENGINEERING, 2017, 26 (04) : 433 - 447
  • [49] Ensemble of Heterogeneous Classifiers for Improving Automated Tweet Classification
    Cui, Renhao
    Agrawal, Gagan
    Ramnath, Rajiv
    Khuc, Vinh
    [J]. 2016 IEEE 16TH INTERNATIONAL CONFERENCE ON DATA MINING WORKSHOPS (ICDMW), 2016, : 1045 - 1052
  • [50] Microarray Data Classification Using the Spectral-Feature-Based TLS Ensemble Algorithm
    Sun, Zhan-Li
    Wang, Han
    Lau, Wai-Shing
    Seet, Gerald
    Wang, Danwei
    Lam, Kin-Man
    [J]. IEEE TRANSACTIONS ON NANOBIOSCIENCE, 2014, 13 (03) : 289 - 299