The chloroplast genome of Sonneratia ovata: genome structure and comparative analysis

被引：1
|
作者：
Wang, Shi-Quan [1 ]
Ren, Feiyan [1 ]
机构：
[1] Hainan Normal Univ, Coll Life Sci, Minist Educ, Key Lab Ecol Trop Isl,Key Lab Trop Anim & Plant E, Haikou, Hainan, Peoples R China
来源：
MITOCHONDRIAL DNA PART B-RESOURCES | 2022年 / 7卷 / 01期
基金：
中国国家自然科学基金;
关键词：
Sonneratia ovata; chloroplast; phylogenetic analysis; illumina;
D O I：
10.1080/23802359.2021.2008824
中图分类号：
Q3 [遗传学];
学科分类号：
071007 ; 090102 ;
摘要：
Sonneratia ovata is one of the most widely distributed mangrove species worldwide. In this study, the complete chloroplast (cp) genome of S. ovata was sequenced and assembled; its phylogenetic position was confirmed in Lythraceae. The total size of cp genome was 153,052 bp, exhibiting a typical quadripartite structure with a large single copy (LSC) region of 87,238 bp and a small single copy (SSC) region of 18,002 bp, two inverted repeats (IRs) regions of 23,906 bp each. The overall GC content was 37.3%, respectively. We detected 128 genes in cp genome, including 84 protein-coding genes, 36 tRNA genes, and 8 rRNA genes. A phylogenetic analysis showed that S. ovata has a close relationship with S. apetala within the genus Sonneratia.
引用
收藏
页码：226 / 227
页数：2
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