The complete chloroplast genome sequence of Hosta capitata (Koidz.) Nakai (Asparagaceae)

被引:4
|
作者
Jang, Yeeun [1 ,2 ]
Park, Jee Young [1 ,2 ]
Kang, Shin-Jae [1 ,2 ]
Park, Hyun-Seung [1 ,2 ]
Shim, Hyeonah [1 ,2 ]
Lee, Taek Joo [3 ]
Kang, Jung Hwa [3 ]
Sung, Sang Hyun [4 ,5 ]
Yang, Tae-Jin [1 ,2 ]
机构
[1] Seoul Natl Univ, Plant Genom & Breeding Inst, Dept Plant Sci, Coll Agr & Life Sci, Seoul 151921, South Korea
[2] Seoul Natl Univ, Res Inst Agr & Life Sci, Coll Agr & Life Sci, Seoul 151921, South Korea
[3] Hantaek Bot Garden, Yongin, South Korea
[4] Seoul Natl Univ, Coll Pharm, Seoul, South Korea
[5] Seoul Natl Univ, Res Inst Pharmaceut Sci, Seoul, South Korea
来源
MITOCHONDRIAL DNA PART B-RESOURCES | 2018年 / 3卷 / 02期
关键词
Hosta capitata (Koidz.) Nakai; chloroplast genome; phylogenetic analysis; KOREA;
D O I
10.1080/23802359.2018.1511858
中图分类号
Q3 [遗传学];
学科分类号
071007 ; 090102 ;
摘要
Hosta capitata (Koidz.) Nakai is an herbaceous perennial plant belonging to the Asparagaceae family and has become a popular ornamental plant. In this study, the chloroplast genome sequence of H. capitata was completed by de novo assembly with whole genome sequence data. The chloroplast genome of H. capitata is 156,416 bp in length, which is composed of a large single-copy (LSC) of 84,788 bp, a small single-copy (SSC) of 18,206 bp, and a pair of inverted repeat regions (IRa and IRb) of 26,711 bp, as four distinct parts. In total, 114 genes were identified including 80 protein-coding genes, 30 tRNA genes, and four rRNA genes. The phylogenetic analysis revealed that H. capitata has a close relationship with other Hosta species, H. minor and H. ventricosa, but is farther than the distance between them.
引用
收藏
页码:1052 / 1053
页数:2
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