The complete chloroplast genome of ornamental plant Hosta ensata (Asparagaceae)

被引:1
|
作者
Qu, XiaoJie [1 ,2 ]
Liu, HongZhang [1 ]
Sui, ChangHai [1 ]
Liu, ShuYing [1 ]
机构
[1] Jilin Agr Univ, Coll Life Sci, 2888 Xincheng St, Changchun 130118, Jilin, Peoples R China
[2] Changchun Univ Sci & Technol, Sch Life Sci & Technol, Changchun, Peoples R China
来源
MITOCHONDRIAL DNA PART B-RESOURCES | 2020年 / 5卷 / 02期
关键词
Hosta ensata; Illumina sequencing; phylogenetic analysis; chloroplast genome; SEQUENCE;
D O I
10.1080/23802359.2020.1730258
中图分类号
Q3 [遗传学];
学科分类号
071007 ; 090102 ;
摘要
Hosta ensata (Asparagaceae) is a perennial plant with great value for its decorative leaves and colorful flowers, which is massively cultivated in parks and gardens for ornamental purposes. Here, the complete chloroplast genome of the H. ensata has been constructed from the Illumina sequencing data. The circular cp genome is 156,712 bp in size and comprises of a pair of inverted repeat (IR) regions of 24,646 bp each, a large single-copy (LSC) region of 85,284 bp, and a small single-copy (SSC) region of 22,136 bp. The total GC content is 37.8%, while the corresponding values of the LSC, SSC, and IR regions are 35.9, 33.1, and 43.3%, respectively. The chloroplast genome contains 131 genes, including 85 protein-coding genes, 8 ribosomal RNA genes, and 38 transfer RNA genes. The maximum-likelihood phylogenetic analysis showed a strong sister relationship with Hosta yingeri and Hosta capitata in Hosta. Our findings provide a foundation for further investigation of chloroplast genome evolution in ornamental plant Hosta.
引用
收藏
页码:1143 / 1144
页数:2
相关论文
共 50 条
  • [1] The complete chloroplast genome of a Korean endemic ornamental plant Hosta yingeri S. B. Jones (Asparagaceae)
    Lim, Chae Eun
    Kim, Soonok
    Lee, Hyun Oh
    Ryu, Se-A
    Lee, Byoung-Yoon
    [J]. MITOCHONDRIAL DNA PART B-RESOURCES, 2017, 2 (02): : 800 - 801
  • [2] The complete chloroplast genome sequence of Hosta capitata (Koidz.) Nakai (Asparagaceae)
    Jang, Yeeun
    Park, Jee Young
    Kang, Shin-Jae
    Park, Hyun-Seung
    Shim, Hyeonah
    Lee, Taek Joo
    Kang, Jung Hwa
    Sung, Sang Hyun
    Yang, Tae-Jin
    [J]. MITOCHONDRIAL DNA PART B-RESOURCES, 2018, 3 (02): : 1052 - 1053
  • [3] The complete chloroplast genome of Primula vialii (Primulaceae), an ornamental plant
    Liu, Yunqi
    Zhang, Li
    Wang, Shubao
    Li, Rui
    Huang, Yuan
    [J]. MITOCHONDRIAL DNA PART B-RESOURCES, 2023, 8 (05): : 619 - 623
  • [4] Characterization of the complete chloroplast genome of the ornamental plant Osmanthus cooperi
    Wang, Xiaofei
    Cai, Fuyue
    Zhang, Cheng
    Zhang, Min
    Li, Yongfu
    Duan, Yifan
    [J]. MITOCHONDRIAL DNA PART B-RESOURCES, 2019, 4 (02): : 2314 - 2315
  • [5] The complete chloroplast genome of Cerasus dictyoneura, an ornamental plant of China
    Liu, Jing
    Yin, Rong
    Xu, Zhe
    Tian, Ying
    [J]. MITOCHONDRIAL DNA PART B-RESOURCES, 2019, 4 (02): : 3383 - 3385
  • [6] The complete chloroplast genome of Ophiopogon japonicus, an ornamental and medicinal plant
    Yuan, Can
    Peng, Fang
    Tao, Shan
    Sha, Xiu-Fen
    Xiong, Miao
    Chen, Yuan-Yuan
    Mu, Fang-Sheng
    Zhang, Chao
    [J]. MITOCHONDRIAL DNA PART B-RESOURCES, 2019, 4 (02): : 2843 - 2844
  • [7] The complete chloroplast genome of the Buddleja alternifolia (Buddleiaceae), an ornamental plant
    Jia, Guolun
    Wang, Weirui
    Liang, Xiaoqing
    Li, Peng
    [J]. MITOCHONDRIAL DNA PART B-RESOURCES, 2020, 5 (01): : 392 - 393
  • [8] The complete chloroplast genome of the ornamental plant Primula violaris (Primulaceae)
    Chai, Weiguo
    Li, Huimin
    Zhang, Caijuan
    Zhao, Bo
    Xia, Pengguo
    [J]. MITOCHONDRIAL DNA PART B-RESOURCES, 2021, 6 (12): : 3429 - 3430
  • [9] The complete chloroplast genome of the Lonicera maackii (Caprifoliaceae), an ornamental plant
    Jia, Guolun
    Wang, Huan
    Yu, Pei
    Li, Peng
    [J]. MITOCHONDRIAL DNA PART B-RESOURCES, 2020, 5 (01): : 560 - 561
  • [10] The complete chloroplast genome of Polygonatum falcatum (Asparagaceae)
    Choi, Tae-Young
    Yun, Se-Hyun
    Lee, Soo-Rang
    [J]. KOREAN JOURNAL OF PLANT TAXONOMY, 2022, 52 (01): : 80 - 83