The complete chloroplast genome sequence of Michelia floribunda

被引:0
|
作者
Sima, Yongkang [1 ,2 ]
Li, Yunqing [1 ,2 ]
Wang, Yi [1 ,2 ]
机构
[1] Yunnan Acad Forestry, Lab Forest Plant Cultivat & Utilizat, Kunming 650204, Yunnan, Peoples R China
[2] Key Lab Rare & Endangered Forest Plants State For, Kunming 650204, Yunnan, Peoples R China
来源
MITOCHONDRIAL DNA PART B-RESOURCES | 2020年 / 5卷 / 02期
基金
中国国家自然科学基金;
关键词
Michelia floribunda; chloroplast; Illumina sequencing; phylogenetic analysis;
D O I
10.1080/23802359.2020.1730730
中图分类号
Q3 [遗传学];
学科分类号
071007 ; 090102 ;
摘要
The first complete chloroplast genome (cpDNA) sequence of Michelia floribunda was determined from Illumina HiSeq pair-end sequencing data in this study. The cpDNA is 160,049 bp in length, contains a large single-copy region (LSC) of 88,140 bp and a small single-copy region (SSC) of 18,773 bp, which were separated by a pair of inverted repeats (IR) regions of 26,568 bp. The genome contains 132 genes, including 87 protein-coding genes, 8 ribosomal RNA genes, and 37 transfer RNA genes. Further phylogenomic analysis showed that M. floribunda was closely related to Michelia yunnanensis in Michelieae tribe.
引用
收藏
页码:1225 / 1226
页数:2
相关论文
共 50 条
  • [21] The complete chloroplast genome sequence of Celtis tetrandra
    Wang, Yi
    Yuan, Xiaolong
    Zhang, Jinfeng
    MITOCHONDRIAL DNA PART B-RESOURCES, 2019, 4 (02): : 3463 - 3464
  • [22] The complete chloroplast genome sequence of Dendrocalamus sinicus
    Wang, Yi
    Yuan, Xiaolong
    Li, Yunqing
    Zhang, Jinfeng
    MITOCHONDRIAL DNA PART B-RESOURCES, 2019, 4 (02): : 2988 - 2989
  • [23] The complete chloroplast genome sequence of Jacobaea cannabifolia
    Su, Xiaoyue
    Cao, Huiyan
    He, Lianqing
    He, Jiajun
    Qin, Chen
    Wang, Panpan
    Kong, Lingyang
    Wang, Yu
    Ren, Weichao
    Ma, Wei
    MITOCHONDRIAL DNA PART B-RESOURCES, 2024, 9 (01): : 219 - 222
  • [24] The complete chloroplast genome sequence of Olea ferruginea
    Wang, Yi
    Hao, Jiabo
    Yuan, Xiaolong
    Lu, Bin
    MITOCHONDRIAL DNA PART B-RESOURCES, 2019, 4 (02): : 2990 - 2991
  • [25] The complete chloroplast genome sequence of Senna bicapsularis
    Hou, Zhe
    MITOCHONDRIAL DNA PART B-RESOURCES, 2020, 5 (03): : 2095 - 2096
  • [26] The complete chloroplast genome sequence ofVitis champinii
    Xiang, Jiang
    Wei, Lingzhu
    Cheng, Jianhui
    Li, Mingshan
    Cui, Pengfei
    Wu, Jiang
    MITOCHONDRIAL DNA PART B-RESOURCES, 2020, 5 (03): : 2864 - 2865
  • [27] The complete chloroplast genome sequence of Kadsura interior
    Fu, Yupin
    Li, Yunqing
    Chen, Wei
    Wang, Yi
    MITOCHONDRIAL DNA PART B-RESOURCES, 2020, 5 (01): : 515 - 516
  • [28] The complete chloroplast genome sequence of Dalbergia oliveri
    Zhang, Jinfeng
    Li, Yunqing
    Heng, Sokh
    Wang, Yi
    MITOCHONDRIAL DNA PART B-RESOURCES, 2020, 5 (01): : 707 - 708
  • [29] The complete chloroplast genome sequence of Artocarpus hypargyreus
    Li, Dong-Lin
    Gul, Juma
    He, Jin-Ming
    MITOCHONDRIAL DNA PART B-RESOURCES, 2020, 5 (01): : 910 - 911
  • [30] The complete chloroplast genome sequence of Cinnamomum kotoense
    Yuan, Xiaolong
    Li, Yunqing
    Wang, Yi
    MITOCHONDRIAL DNA PART B-RESOURCES, 2020, 5 (01): : 331 - 332